RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 C16orf87Q6PH81 154 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 LINGO4Q6UY18 593 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 LIMS2Q7Z4I7 341 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 FAM126BQ8IXS8 530 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 SIDT2Q8NBJ9 832 aaKnown RBP12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 NCSTNQ92542 709 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 NSMCE2Q96MF7 247 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 RANBP9Q96S59 729 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 CMTM6Q9NX76 183 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 HACD3Q9P035 362 aa12.83□□□□□ -0.36
HMGCS1-201ENST00000325110 TNS1Q9HBL0 1735 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 MOXD2PA6NHM9 499 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 H3BNH8 94 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 VPS26AO75436 327 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ECI2O75521 394 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 RPP40O75818 363 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 C8BP07358 591 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CDK4P11802 303 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 HOXD8P13378 290 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 RPL26P61254 145 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 TRAP1Q12931 704 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 LCP2Q13094 533 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 MILR1Q7Z6M3 343 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CPNE9Q8IYJ1 553 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 LINGO1Q96FE5 620 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNF597Q96LX8 424 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 MUC3BQ9H195 1237 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 INTS7Q9NVH2 962 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 EVLQ9UI08 416 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 TRIM24O15164 1050 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CYBBP04839 570 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 GPX3P22352 226 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ENTPD1P49961 510 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ADAM17P78536 824 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 PHEXP78562 749 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNF549Q6P9A3 640 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 TICAM1Q8IUC6 712 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CMTR2Q8IYT2 770 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 PARP8Q8N3A8 854 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 OR6K2Q8NGY2 324 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 UBXN10Q96LJ8 280 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CCSER2Q9H7U1 834 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ZFP14Q9HCL3 533 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 TRMT13Q9NUP7 481 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 SMPD4Q9NXE4 827 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 TMEM181Q9P2C4 612 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 MAP10Q9P2G4 905 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CEPT1Q9Y6K0 416 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 OR1I1O60431 355 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 S100BP04271 92 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CA8P35219 290 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 DGKQP52824 942 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 RPS24P62847 133 aaKnown RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 ZNF33AQ06730 810 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 FAM171BQ6P995 826 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 SLC2A7Q6PXP3 512 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 GPSM1Q86YR5 675 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CDKN2AIPNLQ96HQ2 116 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 HOPXQ9BPY8 73 aaPredicted RBP12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 MCMBPQ9BTE3 642 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 FBXO44Q9H4M3 255 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 CXorf21Q9HAI6 301 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 OLAHQ9NV23 265 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 SLC8A2Q9UPR5 921 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 PCDHB5Q9Y5E4 795 aa12.82□□□□□ -0.36
HMGCS1-201ENST00000325110 KANSL1LA0AUZ9 987 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 C2orf81A6NN90 581 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 MUSKO15146 869 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 LDB2O43679 373 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 TLR5O60602 858 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 SLC22A3O75751 556 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 SNAP29O95721 258 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 CNPP09543 421 aaKnown RBP12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 IDO1P14902 403 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 SLC6A2P23975 617 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 TRAF2Q12933 501 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 UGT3A1Q6NUS8 523 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 MSANTD2Q6P1R3 559 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 TMEM26Q6ZUK4 368 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 PGBD5Q8N414 524 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 KLHDC9Q8NEP7 349 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 ROPN1LQ96C74 230 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 ABCG8Q9H221 673 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 ATP13A1Q9HD20 1204 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 FKBPLQ9UIM3 349 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 A0A1W2PPW3 197 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 TCRBV3S1A0A5B6 114 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 TMX2-CTNND1H3BSU7 103 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 AP1G1O43747 822 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 FGF1P05230 155 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 ATP1A4Q13733 1029 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 NFE2Q16621 373 aaPredicted RBP12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 IMPG1Q17R60 797 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 PAGE3Q5JUK9 113 aa12.81□□□□□ -0.36
HMGCS1-201ENST00000325110 XKR5Q6UX68 686 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms