RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ZNF549Q6P9A3 640 aa15.18■□□□□ 0.02
PRPF3-201ENST00000324862 GPATCH11Q8N954 259 aa15.18■□□□□ 0.02
PRPF3-201ENST00000324862 ITM2CQ9NQX7 267 aa15.18■□□□□ 0.02
PRPF3-201ENST00000324862 MBNL1Q9NR56 388 aaKnown RBP15.18■□□□□ 0.02
PRPF3-201ENST00000324862 DLGAP2Q9P1A6 1054 aa15.18■□□□□ 0.02
PRPF3-201ENST00000324862 FETUBQ9UGM5 382 aa15.18■□□□□ 0.02
PRPF3-201ENST00000324862 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
PRPF3-201ENST00000324862 GOLGA6L10A6NI86 522 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 RAD51BO15315 384 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 DCXO43602 365 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 RNGTTO60942 597 aaKnown RBP15.17■□□□□ 0.02
PRPF3-201ENST00000324862 ATG13O75143 517 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 NFKBIAP25963 317 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 LEPRP48357 1165 aaKnown RBP15.17■□□□□ 0.02
PRPF3-201ENST00000324862 MAGOHP61326 146 aaKnown RBP15.17■□□□□ 0.02
PRPF3-201ENST00000324862 ZBTB16Q05516 673 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 PPM1JQ5JR12 505 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 ARMC3Q5W041 872 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 SNX20Q7Z614 316 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 EXOC3L1Q86VI1 746 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 SRRM1Q8IYB3 904 aaKnown RBP15.17■□□□□ 0.02
PRPF3-201ENST00000324862 SPEM1Q8N4L4 309 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 DCLK2Q8N568 766 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 GOLGA6L1Q8N7Z2 621 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 GPR150Q8NGU9 434 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 NUS1Q96E22 293 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 PLEKHG4BQ96PX9 1271 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 LGALS13Q9UHV8 139 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 CRLS1Q9UJA2 301 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 PRSS21Q9Y6M0 314 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 LRRK1Q38SD2 2015 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 IQCF5A8MTL0 148 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 SLC31A1O15431 190 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 TSPAN6O43657 245 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 AP1G1O43747 822 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 DNAJC6O75061 913 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 TM7SF2O76062 418 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 ALDOAP04075 364 aaKnown RBP15.17■□□□□ 0.02
PRPF3-201ENST00000324862 FMO4P31512 558 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 LIMK2P53671 638 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 TYSND1Q2T9J0 566 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 TNFAIP8L3Q5GJ75 292 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 ZNF449Q6P9G9 518 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 SLC41A1Q8IVJ1 513 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 DEFB119Q8N690 84 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 CALML6Q8TD86 181 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 PGM2Q96G03 612 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 C12orf65Q9H3J6 166 aaKnown RBP15.17■□□□□ 0.02
PRPF3-201ENST00000324862 ACBD3Q9H3P7 528 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 USP36Q9P275 1121 aaKnown RBP15.17■□□□□ 0.02
PRPF3-201ENST00000324862 ZNF180Q9UJW8 692 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 NCKAP1Q9Y2A7 1128 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 CA5BQ9Y2D0 317 aa15.17■□□□□ 0.02
PRPF3-201ENST00000324862 OPA1O60313 960 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 PCCBP05166 539 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 ITGALP20701 1170 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 CD151P48509 253 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 SUOXP51687 545 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 WSCD2Q2TBF2 565 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 GRTP1Q5TC63 336 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 USP30Q70CQ3 517 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 LPGAT1Q92604 370 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 TOE1Q96GM8 510 aaKnown RBP15.16■□□□□ 0.02
PRPF3-201ENST00000324862 ATP6V1G3Q96LB4 118 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 LENG8Q96PV6 779 aaPredicted RBP15.16■□□□□ 0.02
PRPF3-201ENST00000324862 OLFM1Q99784 485 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 BTBD1Q9H0C5 482 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 C6orf106Q9H6K1 298 aaPredicted RBP15.16■□□□□ 0.02
PRPF3-201ENST00000324862 EBF2Q9HAK2 575 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 GALPQ9UBC7 116 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 SLC39A10Q9ULF5 831 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 FZD4Q9ULV1 537 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 SCML1Q9UN30 329 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 PSMD11O00231 422 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 TPP1O14773 563 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 PHGDHO43175 533 aaKnown RBP15.16■□□□□ 0.02
PRPF3-201ENST00000324862 C7P10643 843 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 ACRV1P26436 265 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 RPS9P46781 194 aaKnown RBP15.16■□□□□ 0.02
PRPF3-201ENST00000324862 B4GALNT1Q00973 533 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 TMEM259Q4ZIN3 620 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 RAET1GQ6H3X3 334 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 DET1Q7L5Y6 550 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 SDCCAG8Q86SQ7 713 aaPredicted RBP15.16■□□□□ 0.02
PRPF3-201ENST00000324862 TRABD2AQ86V40 505 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 PIM3Q86V86 326 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 KBTBD6Q86V97 674 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 CEP97Q8IW35 865 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 NXPE1Q8N323 547 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 GDAP1Q8TB36 358 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 RHOJQ9H4E5 214 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 TRPM6Q9BX84 2022 aa15.16■□□□□ 0.02
PRPF3-201ENST00000324862 TRBV5-4A0A0C4DH59 114 aa15.15■□□□□ 0.02
PRPF3-201ENST00000324862 FAM95CA0A1B0GW59 222 aa15.15■□□□□ 0.02
PRPF3-201ENST00000324862 AGAP14A8MT82 685 aa15.15■□□□□ 0.02
PRPF3-201ENST00000324862 NDUFS3O75489 264 aa15.15■□□□□ 0.02
PRPF3-201ENST00000324862 RFPL1O75677 317 aa15.15■□□□□ 0.02
PRPF3-201ENST00000324862 OGNP20774 298 aaKnown RBP15.15■□□□□ 0.02
PRPF3-201ENST00000324862 HPDP32754 393 aaPredicted RBP15.15■□□□□ 0.02
PRPF3-201ENST00000324862 CDKN2DP55273 166 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms