RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 IL31Q6EBC2 164 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 PRSS55Q6UWB4 352 aaPredicted RBP13.71□□□□□ -0.21
ATG4C-201ENST00000317868 CHERPQ8IWX8 916 aaKnown RBP13.71□□□□□ -0.21
ATG4C-201ENST00000317868 FBXO22Q8NEZ5 403 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 TSPEARQ8WU66 669 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 ZUFSPQ96AP4 578 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 MYRFLQ96LU7 910 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 SLC30A3Q99726 388 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 ARMC1Q9NVT9 282 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 GALPQ9UBC7 116 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 VPS4BO75351 444 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 HSD17B1P14061 328 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 EEF1DP29692 281 aaKnown RBP13.71□□□□□ -0.21
ATG4C-201ENST00000317868 EML3Q32P44 896 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 SPATS1Q496A3 300 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 PSAPL1Q6NUJ1 521 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 SLC30A9Q6PML9 568 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 TTC30BQ8N4P2 665 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 HOPXQ9BPY8 73 aaPredicted RBP13.71□□□□□ -0.21
ATG4C-201ENST00000317868 NUSAP1Q9BXS6 441 aaKnown RBP13.71□□□□□ -0.21
ATG4C-201ENST00000317868 STARD7Q9NQZ5 370 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 PCTPQ9UKL6 214 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 NDUFAF1Q9Y375 327 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 GPR45Q9Y5Y3 372 aa13.71□□□□□ -0.21
ATG4C-201ENST00000317868 NME4O00746 187 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 RHOBTB1O94844 696 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 CDKN1CP49918 316 aaPredicted RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 ATXN3P54252 364 aaPredicted RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 STX1BP61266 288 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 ROR2Q01974 943 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 FOXM1Q08050 763 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 GRIK2Q13002 908 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 PRMT9Q6P2P2 845 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 PIANPQ8IYJ0 282 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 NKAPQ8N5F7 415 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SPDYE1Q8NFV5 336 aaPredicted RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 TRPC4APQ8TEL6 797 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 EXT2Q93063 718 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 LRCH3Q96II8 777 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 GPR21Q99679 349 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 HSFX1Q9UBD0 423 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 BACE2Q9Y5Z0 518 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SLC4A7Q9Y6M7 1214 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 A0A1B0GVM2 712 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 MT-CO1P00395 513 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 FMO4P31512 558 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SLC7A2P52569 658 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 TXNL4AP83876 142 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 RAD51Q06609 339 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 TSNQ15631 228 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 PABPC1LQ4VXU2 614 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 THEMIS2Q5TEJ8 643 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 FAM126BQ8IXS8 530 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 MIER2Q8N344 545 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 FBXO39Q8N4B4 442 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 GOLM1Q8NBJ4 401 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 PCYOX1LQ8NBM8 494 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 CD200R1Q8TD46 325 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SMIM14Q96QK8 99 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 BRINP2Q9C0B6 783 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SCUBE2Q9NQ36 999 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 GIMAP2Q9UG22 337 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 AGO1Q9UL18 857 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 RNF112Q9ULX5 631 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 TMCO1Q9UM00 188 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 VPS9D1Q9Y2B5 631 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SMIM31A0A1B0GVY4 71 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 C7orf72A4D263 438 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SYCE1LA8MT33 242 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 CDC7O00311 574 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 FZD6O60353 706 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 LBPP18428 481 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 ATP6V1B2P21281 511 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 LPOP22079 712 aaPredicted RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SCNN1BP51168 640 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 HK3P52790 923 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 NAIF1Q69YI7 327 aaPredicted RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 CWF19L1Q69YN2 538 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 NCEH1Q6PIU2 408 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 TXNDC11Q6PKC3 985 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 BLOC1S3Q6QNY0 202 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 ZNF783Q6ZMS7 281 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 DENND1CQ8IV53 801 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 RYBPQ8N488 228 aaPredicted RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 SLC39A3Q9BRY0 314 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 CFHR5Q9BXR6 569 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 CNOT6Q9ULM6 557 aaKnown RBP13.7□□□□□ -0.22
ATG4C-201ENST00000317868 PADI4Q9UM07 663 aa13.7□□□□□ -0.22
ATG4C-201ENST00000317868 PIKFYVEQ9Y2I7 2098 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 ANKRD66B4E2M5 251 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 GFRA2O00451 464 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 TXNDC9O14530 226 aa13.69□□□□□ -0.22
ATG4C-201ENST00000317868 HOXA2O43364 376 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms