RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CYLC1P35663 651 aaPredicted RBP17.61■□□□□ 0.41
TPM1-203ENST00000317516 RHDQ02161 417 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 PCSK7Q16549 785 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 TFDP3Q5H9I0 405 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 ARHGAP40Q5TG30 622 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 TMEM164Q5U3C3 297 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 KAZNQ674X7 775 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 CHST15Q7LFX5 561 aaPredicted RBP17.61■□□□□ 0.41
TPM1-203ENST00000317516 LYSMD3Q7Z3D4 306 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 TMC3Q7Z5M5 1100 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 SLITRK4Q8IW52 837 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 TC2NQ8N9U0 490 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 SLC39A7Q92504 469 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 P3H4Q92791 437 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 TEKT5Q96M29 485 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 TRIB3Q96RU7 358 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 WDR24Q96S15 920 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 ZSCAN5AQ9BUG6 496 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 SPATA16Q9BXB7 569 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 GPR63Q9BZJ6 419 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 STN1Q9H668 368 aaKnown RBP17.61■□□□□ 0.41
TPM1-203ENST00000317516 RDH14Q9HBH5 336 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 CPNE5Q9HCH3 593 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 ACSL6Q9UKU0 697 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 CNOT6Q9ULM6 557 aaKnown RBP17.61■□□□□ 0.41
TPM1-203ENST00000317516 SSUH2Q9Y2M2 353 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 PLEKHM1Q9Y4G2 1056 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 PCDHA13Q9Y5I0 950 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 ST14Q9Y5Y6 855 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 PTPRQQ9UMZ3 2332 aa17.61■□□□□ 0.41
TPM1-203ENST00000317516 IGSF10Q6WRI0 2623 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 PPM1DO15297 605 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 DNAJC6O75061 913 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SLC25A14O95258 325 aaPredicted RBP17.6■□□□□ 0.41
TPM1-203ENST00000317516 LCA5LO95447 670 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 NDST3O95803 873 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 HGFP14210 728 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SLC2A4P14672 509 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 CD1CP29017 333 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 GPLD1P80108 840 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SQSTM1Q13501 440 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 TRA2AQ13595 282 aaKnown RBP eCLIP17.6■□□□□ 0.41
TPM1-203ENST00000317516 TAZQ16635 292 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 PDPK2PQ6A1A2 396 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SPOCD1Q6ZMY3 1216 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 CCDC81Q6ZN84 652 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 PATE1Q8WXA2 126 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SH3KBP1Q96B97 665 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 TADA1Q96BN2 335 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 CALR3Q96L12 384 aaKnown RBP17.6■□□□□ 0.41
TPM1-203ENST00000317516 VAT1Q99536 393 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 B3GNT4Q9C0J1 378 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 CARD9Q9H257 536 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SEMA6CQ9H3T2 930 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 WDR70Q9NW82 654 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 KCNK4Q9NYG8 393 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SHOC2Q9UQ13 582 aa17.6■□□□□ 0.41
TPM1-203ENST00000317516 SHROOM3Q8TF72 1996 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 FADS2P1A8MWK0 482 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 GPR89AB7ZAQ6 455 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 ERVH48-1M5A8F1 160 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 HGSO14964 777 aaPredicted RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 GRID2O43424 1007 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 GPR89BP0CG08 455 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 PTPN3P26045 913 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 FASLGP48023 281 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 PPM1FP49593 454 aaPredicted RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 DCDC1P59894 354 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 CLN3Q13286 438 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 PRKD1Q15139 912 aaPredicted RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 TAF1BQ53T94 588 aaPredicted RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 ZNF569Q5MCW4 686 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 CCDC50Q8IVM0 306 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 KATNAL2Q8IYT4 538 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 SFRP1Q8N474 314 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 OR4D9Q8NGE8 314 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 SNRNP27Q8WVK2 155 aaKnown RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 AHCYL2Q96HN2 611 aaKnown RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 RBM41Q96IZ5 413 aaKnown RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 CCNL2Q96S94 520 aaPredicted RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 SLC38A3Q99624 504 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 TRIM39Q9HCM9 518 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 SAE1Q9UBE0 346 aaPredicted RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 FAM153AQ9UHL3 310 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 ZNF711Q9Y462 761 aa17.59■□□□□ 0.41
TPM1-203ENST00000317516 OAS3Q9Y6K5 1087 aaKnown RBP17.59■□□□□ 0.41
TPM1-203ENST00000317516 TRBV23OR9-2A0A075B6M9 112 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 IGHV1OR21-1A0A087WYE8 117 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 OR5K4A6NMS3 321 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 K7ENP7 123 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 NUAK1O60285 661 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 PMPCBO75439 489 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 MT-CYBP00156 380 aaPredicted RBP17.58■□□□□ 0.4
TPM1-203ENST00000317516 EPOP01588 193 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 PIRTP0C851 137 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 ITIH1P19827 911 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 LIMK2P53671 638 aa17.58■□□□□ 0.4
TPM1-203ENST00000317516 MAPK10P53779 464 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms