RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 OSBPP22059 807 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 ME2P23368 584 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 RPL22P35268 128 aaKnown RBP6.63□□□□□ -1.35
ZNF540-201ENST00000316433 ASPAP45381 313 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 NUDT2P50583 147 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 SNX16P57768 344 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 BPIFB3P59826 476 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 MERTKQ12866 999 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 LTB4RQ15722 352 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 CATSPEREQ5SY80 951 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 RETSATQ6NUM9 610 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 FAM180BQ6P0A1 224 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 TMEM81Q6P7N7 255 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 CLEC14AQ86T13 490 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 ADCK1Q86TW2 530 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 STK32CQ86UX6 486 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 SCUBE3Q8IX30 993 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 ADGRF2Q8IZF7 708 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 WDTC1Q8N5D0 677 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 LINC01465Q8N7H1 131 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 KCT2Q8NC54 265 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 OR4M1Q8NGD0 313 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 OR6P1Q8NGX9 317 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 PHOSPHO2Q8TCD6 241 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 ZFAND1Q8TCF1 268 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 PHF10Q8WUB8 498 aaKnown RBP6.63□□□□□ -1.35
ZNF540-201ENST00000316433 KLHL6Q8WZ60 621 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 PROX1Q92786 737 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 MOGAT1Q96PD6 335 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 QKIQ96PU8 341 aaKnown RBP eCLIP6.63□□□□□ -1.35
ZNF540-201ENST00000316433 LRRC40Q9H9A6 602 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 TRPM5Q9NZQ8 1165 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 ZNF70Q9UC06 446 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-201ENST00000316433 WARS2Q9UGM6 360 aaKnown RBP6.63□□□□□ -1.35
ZNF540-201ENST00000316433 TCEAL9Q9UHQ7 104 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 DTX4Q9Y2E6 619 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 PCDHA11Q9Y5I1 949 aa6.63□□□□□ -1.35
ZNF540-201ENST00000316433 RAB19A4D1S5 217 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 LACTBL1A8MY62 500 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 TRIM49D1C9J1S8 452 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 E7ENX8 843 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SLCO1B7G3V0H7 640 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 LRCH4O75427 683 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SEC24AO95486 1093 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 KRT1P04264 644 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 RPS17P08708 135 aaKnown RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SLC2A3P11169 496 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 NCF2P19878 526 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 HOXA1P49639 335 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 NUBP1P53384 320 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 DAB2P98082 770 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PICALMQ13492 652 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CEACAM7Q14002 265 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 DPYSL3Q14195 570 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GRM7Q14831 915 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 UGCGQ16739 394 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SLC36A3Q495N2 470 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 RBM20Q5T481 1227 aaKnown RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 XAF1Q6GPH4 301 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CFAP77Q6ZQR2 320 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GDPD3Q7L5L3 318 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 LINC00523Q86TU6 105 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CLEC10AQ8IUN9 316 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SYTL1Q8IYJ3 562 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SVOPQ8N4V2 548 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SPATA18Q8TC71 538 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SERAC1Q96JX3 654 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 BDH2Q9BUT1 245 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 BCL2L14Q9BZR8 327 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 ROGDIQ9GZN7 287 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 C20orf27Q9GZN8 174 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 TOR3AQ9H497 397 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SAV1Q9H4B6 383 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SNX15Q9NRS6 342 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 PPP1R14DQ9NXH3 145 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CCDC59Q9P031 241 aaKnown RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 IFT80Q9P2H3 777 aaPredicted RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 AUP1Q9Y679 476 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GREB1Q4ZG55 1949 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 C17orf113A0A1B0GUU1 675 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 ERI2A8K979 691 aaKnown RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 M0R3G1 203 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 COPEO14579 308 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 ACOT8O14734 319 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GATCO43716 136 aaKnown RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SYNCRIPO60506 623 aaKnown RBP6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GMDSO60547 372 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GLRA3O75311 464 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 TADA2AO75478 443 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SNAPINO95295 136 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 APOA1P02647 267 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 APOC1P02654 83 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 SLC4A1P02730 911 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 RBP1P09455 135 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CYP2C8P10632 490 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 CKMT2P17540 419 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 MAGP20916 626 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 GLDCP23378 1020 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 IL12RB1P42701 662 aa6.62□□□□□ -1.35
ZNF540-201ENST00000316433 YAP1P46937 504 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms