RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FAM45BPQ6NSW5 357 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 FBXO46Q6PJ61 603 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 PACRGLQ8N7B6 248 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 FAM45AQ8TCE6 357 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 CCM2LQ9NUG4 571 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 NSMCE4AQ9NXX6 385 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 EGFL7Q9UHF1 273 aa17.13■□□□□ 0.33
SCAMP4-201ENST00000316097 E9PAM4 449 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 JCHAINP01591 159 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 OXCT1P55809 520 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 PRPSAP1Q14558 356 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC36A3Q495N2 470 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 BEND5Q7L4P6 421 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 CHST15Q7LFX5 561 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 CIR1Q86X95 450 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 SPPL2CQ8IUH8 684 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 TANKQ92844 425 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC35B4Q969S0 331 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 ZNF419Q96HQ0 510 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 ABHD8Q96I13 439 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 SERPINB11Q96P15 392 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 DOK1Q99704 481 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 GPATCH1Q9BRR8 931 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 IL37Q9NZH6 218 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 MICAL3Q7RTP6 2002 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 ATP6AP2A0A1C7CYW4 349 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC12A8A0AV02 714 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 DHRS12A0PJE2 317 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC38A8A6NNN8 435 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 CLOCKO15516 846 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 ADAM23O75077 832 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 ATP6AP2O75787 350 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 CNTN5O94779 1100 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 EFEMP2O95967 443 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 BMXP51813 675 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 PLK1P53350 603 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 KCTD8Q6ZWB6 473 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 HEXDCQ8WVB3 486 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 MYEOVQ96EZ4 313 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 LRCH3Q96II8 777 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 ELMO2Q96JJ3 720 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 TRIM62Q9BVG3 475 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC39A8Q9C0K1 460 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 MEAF6Q9HAF1 191 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 TRNAU1APQ9NX07 287 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 MARCH2Q9P0N8 246 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 OAZ3Q9UMX2 235 aa17.12■□□□□ 0.33
SCAMP4-201ENST00000316097 TANC1Q9C0D5 1861 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 MYO16Q9Y6X6 1858 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 TRIM64A6NGJ6 449 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 ERI2A8K979 691 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 PARNO95453 639 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 TIMP1P01033 207 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 ATP5F1P24539 256 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 TTKP33981 857 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 HALP42357 657 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 YAP1P46937 504 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 RXRGP48443 463 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 KCNQ1P51787 676 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 BRMS1LQ5PSV4 323 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 ANKRD26P1Q6NSI1 321 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 OTOP3Q7RTS5 596 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 CUZD1Q86UP6 607 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 AFAP1L2Q8N4X5 818 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC39A13Q96H72 371 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 MTRRQ9UBK8 725 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 TLR6Q9Y2C9 796 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 ZNF182P17025 639 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 KCNA5P22460 613 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 CA8P35219 290 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 MLLT6P55198 1093 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 GALNT2Q10471 571 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 CDH17Q12864 832 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 TRAF2Q12933 501 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 ALFQ53S48 1182 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 SLC8B1Q6J4K2 584 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 C8orf82Q6P1X6 216 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 PDZD4Q76G19 769 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 ARHGAP12Q8IWW6 846 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 ZNF689Q96CS4 500 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 FBRSL1Q9HCM7 1045 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 TLR8Q9NR97 1041 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 AGPAT4Q9NRZ5 378 aa17.11■□□□□ 0.33
SCAMP4-201ENST00000316097 FAM92AA1XBS5 289 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 NME4O00746 187 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 SCAMP3O14828 347 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 NOL3O60936 208 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 CLASP2O75122 1294 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 FASP25445 335 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 TAS2R39P59534 338 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 MS4A13Q5J8X5 152 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 IRAK1BP1Q5VVH5 260 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 RAP1GAP2Q684P5 730 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 ABRAXAS1Q6UWZ7 409 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
SCAMP4-201ENST00000316097 FAR2Q96K12 515 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms