RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 FRMD6Q96NE9 622 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF490Q9ULM2 529 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 PCDHGA3Q9Y5H0 932 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 KLRC2P26717 231 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 TIE1P35590 1138 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CLK3P49761 638 aaKnown RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 HECTD2Q5U5R9 776 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF433Q8N7K0 673 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 VANGL1Q8TAA9 524 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 SKA1Q96BD8 255 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 TLCD1Q96CP7 247 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 APOLD1Q96LR9 279 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 GFM1Q96RP9 751 aaKnown RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 TNKS2Q9H2K2 1166 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ABHD16BQ9H3Z7 469 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 C3orf14Q9HBI5 128 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 FKBP14Q9NWM8 211 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 SEC14L3Q9UDX4 400 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ABHD14A-ACY1A0A1B0GW23 586 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 NDUFS2O75306 463 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 OGNP20774 298 aaKnown RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CBX5P45973 191 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 RAET1GQ6H3X3 334 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 METTL3Q86U44 580 aaKnown RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 AHCYL2Q96HN2 611 aaKnown RBP13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CDT1Q9H211 546 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 CARD8Q9Y2G2 431 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF780BQ9Y6R6 833 aa13.63□□□□□ -0.23
CLCN6-201ENST00000312413 H0Y858 1186 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 GTPBP1O00178 669 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 MT-ND1P03886 318 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 THOP1P52888 689 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 CNTN2Q02246 1040 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 SLC9A4Q6AI14 798 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF613Q6PF04 617 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ZYG11AQ6WRX3 759 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 CHST15Q7LFX5 561 aaPredicted RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 LAPTM4BQ86VI4 370 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 CYP4X1Q8N118 509 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 SVOPLQ8N434 492 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 CPT1BQ92523 772 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 GLOD4Q9HC38 313 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 AGO1Q9UL18 857 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 PPIEQ9UNP9 301 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 SCELO95171 688 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 HOXC6P09630 235 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ATF4P18848 351 aaPredicted RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF697Q5TEC3 545 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 CXorf57Q6NSI4 855 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 BEND5Q7L4P6 421 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 NKD2Q969F2 451 aaPredicted RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 CLIP3Q96DZ5 547 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ACO2Q99798 780 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 AARSD1Q9BTE6 412 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 C12orf4Q9NQ89 552 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 CKLFQ9UBR5 152 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 WASF2Q9Y6W5 498 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 NPEPPSL1A6NEC2 478 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 MAGEB3O15480 346 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ERN1O75460 977 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 REM1O75628 298 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 PSEN2P49810 448 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 KIAA0319LQ8IZA0 1049 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ROPN1LQ96C74 230 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 PCDHB18PQ96TA0 734 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 TGFB1I1O43294 461 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF432O94892 652 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 TNFSF9P41273 254 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 SCNN1GP51170 649 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ZNF730Q6ZMV8 503 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 EXOC2Q96KP1 924 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 MAN2B2Q9Y2E5 1009 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 PRAMEF33A0A0G2JMD5 474 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 MCIDASD6RGH6 385 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 PRAMEF10O60809 474 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 H6PDO95479 791 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 TOP3BO95985 862 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 LGALS2P05162 132 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ADGRE1Q14246 886 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 TOMM20Q15388 145 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 ZBTB6Q15916 424 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 IQCF2Q8IXL9 164 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 SIPA1Q96FS4 1042 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 TRNT1Q96Q11 434 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 C12orf65Q9H3J6 166 aaKnown RBP13.62□□□□□ -0.23
CLCN6-201ENST00000312413 C1orf167Q5SNV9 1468 aa13.62□□□□□ -0.23
CLCN6-201ENST00000312413 A0A1W2PQ72 361 aa13.61□□□□□ -0.23
CLCN6-201ENST00000312413 UBA1P22314 1058 aaKnown RBP13.61□□□□□ -0.23
CLCN6-201ENST00000312413 MMP8P22894 467 aa13.61□□□□□ -0.23
CLCN6-201ENST00000312413 PPP1R15BQ5SWA1 713 aa13.61□□□□□ -0.23
CLCN6-201ENST00000312413 OGFOD2Q6N063 350 aa13.61□□□□□ -0.23
CLCN6-201ENST00000312413 UBE2R2Q712K3 238 aaPredicted RBP13.61□□□□□ -0.23
CLCN6-201ENST00000312413 LHX5Q9H2C1 402 aa13.61□□□□□ -0.23
CLCN6-201ENST00000312413 SEMA3GQ9NS98 782 aa13.61□□□□□ -0.23
CLCN6-201ENST00000312413 RNF19AQ9NV58 838 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms