RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 FABP12A6NFH5 140 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 EHD4Q9H223 541 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 TAS2R7Q9NYW3 318 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 C14orf166Q9Y224 244 aaKnown RBP13.35□□□□□ -0.27
TRIM56-201ENST00000306085 MAP4K5Q9Y4K4 846 aa13.35□□□□□ -0.27
TRIM56-201ENST00000306085 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TRDMT1O14717 391 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 OTCP00480 354 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 UROSP10746 265 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 NYAP1Q6ZVC0 841 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 AUTS2Q8WXX7 1259 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 MKLN1Q9UL63 735 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PCDHGB5Q9Y5G0 923 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ISM1B1AKI9 464 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 HSBP1L1C9JCN9 74 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 NAMPTP43490 491 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TMCO6Q96DC7 493 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 DNPEPQ9ULA0 475 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ASTN2O75129 1339 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 SLC22A3O75751 556 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 GNB3P16520 340 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 EIF4BP23588 611 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 DDX6P26196 483 aaKnown RBP eCLIP13.34□□□□□ -0.272e-7■■□□□ 12.2
TRIM56-201ENST00000306085 CAPZA1P52907 286 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TMEM17Q86X19 198 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ZCCHC9Q8N567 271 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 OR6K6Q8NGW6 343 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 RIPOR3Q96MK2 946 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 MRPL45Q9BRJ2 306 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TCF7L1Q9HCS4 588 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 A0A1B0GVC2 190 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 S100PP25815 95 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 DCKP27707 260 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TPTEP56180 551 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 KCNT2Q6UVM3 1135 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 CD302Q8IX05 232 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 NAXEQ8NCW5 288 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 POLR1EQ9GZS1 481 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ZNF267Q14586 743 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 CDK10Q15131 360 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 C15orf59Q2T9L4 293 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PCID2Q5JVF3 399 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 RNF43Q68DV7 783 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 P2RY8Q86VZ1 359 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PNLDC1Q8NA58 520 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PMEPA1Q969W9 287 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 GSKIPQ9P0R6 139 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 IFNA21P01568 189 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 HNRNPLP14866 589 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 CPSF6Q16630 551 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 CRTC2Q53ET0 693 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 COLEC12Q5KU26 742 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 CERCAMQ5T4B2 595 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 EIF5AL1Q6IS14 154 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ECHDC2Q86YB7 292 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ADCY4Q8NFM4 1077 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ELMO3Q96BJ8 720 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 MCCC1Q96RQ3 725 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 C2orf74A8MZ97 194 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 HEPHQ9BQS7 1158 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 AARSD1Q9BTE6 412 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 FADS3Q9Y5Q0 445 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 SASH3O75995 380 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PRAMEF1O95521 474 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 GZMAP12544 262 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TBCCD1Q9NVR7 557 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 TRPV2Q9Y5S1 764 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 ABL2P42684 1182 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 HERVK_113P62684 666 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 LARS2Q15031 903 aaKnown RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 DENND1CQ8IV53 801 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PHC3Q8NDX5 983 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 SSX3Q99909 188 aa13.34□□□□□ -0.27
TRIM56-201ENST00000306085 PAK6Q9NQU5 681 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 BARX2Q9UMQ3 279 aaPredicted RBP13.34□□□□□ -0.27
TRIM56-201ENST00000306085 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 FADS2P1A8MWK0 482 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 OAZ2O95190 189 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 RGS6P49758 472 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 CCL15Q16663 113 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 FBXO47Q5MNV8 452 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 UFD1Q92890 307 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 TNFRSF25Q93038 417 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 HIPK3Q9H422 1215 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 COMMD3Q9UBI1 195 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 KCNN3Q9UGI6 736 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 COL15A1P39059 1388 aa13.33□□□□□ -0.27
TRIM56-201ENST00000306085 OR6C70A6NIJ9 312 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 HACD1B0YJ81 288 aa13.33□□□□□ -0.28
TRIM56-201ENST00000306085 SCAMP3O14828 347 aaKnown RBP13.33□□□□□ -0.28
TRIM56-201ENST00000306085 VTCN1Q7Z7D3 282 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms