RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PSAPL1Q6NUJ1 521 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 PAQR3Q6TCH7 311 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 TPGS1Q6ZTW0 290 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 OTOP2Q7RTS6 562 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 CUZD1Q86UP6 607 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 GABPB2Q8TAK5 448 aaPredicted RBP21.84■■□□□ 1.09
TPM4-201ENST00000300933 NSUN5Q96P11 429 aaKnown RBP21.84■■□□□ 1.09
TPM4-201ENST00000300933 SLC30A3Q99726 388 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 PCDHB9Q9Y5E1 797 aa21.84■■□□□ 1.09
TPM4-201ENST00000300933 NCF1BA6NI72 391 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 NCF1CA8MVU1 366 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 URODP06132 367 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 NCF1P14598 390 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 ZNF140P52738 457 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 PRMT2P55345 433 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 MYBPC1Q00872 1141 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 PDAP1Q13442 181 aaKnown RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 PFKFB4Q16877 469 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 ACBD5Q5T8D3 534 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 CNKSR3Q6P9H4 555 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 HS6ST3Q8IZP7 471 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 RCN3Q96D15 328 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 POLR3BQ9NW08 1133 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 INSL5Q9Y5Q6 135 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 COPG1Q9Y678 874 aaKnown RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 STX16-NPEPL1H3BU86 382 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 SDHDO14521 159 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 PEX1O43933 1283 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 RBP1P09455 135 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 ALPIP09923 528 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 CD1DP15813 335 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 TPP2P29144 1249 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 CSKP41240 450 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 FAM45BPQ6NSW5 357 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 APCDD1Q8J025 514 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 FAM45AQ8TCE6 357 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 CCDC97Q96F63 343 aaPredicted RBP21.83■■□□□ 1.09
TPM4-201ENST00000300933 PLEKHG4BQ96PX9 1271 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 FEM1AQ9BSK4 669 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 TLR9Q9NR96 1032 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 GIMAP2Q9UG22 337 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 TBX21Q9UL17 535 aa21.83■■□□□ 1.09
TPM4-201ENST00000300933 IQCF5A8MTL0 148 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 DENRO43583 198 aaKnown RBP21.83■■□□□ 1.08
TPM4-201ENST00000300933 RHOBTB1O94844 696 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 FDXRP22570 491 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 KPNA2P52292 529 aaKnown RBP21.83■■□□□ 1.08
TPM4-201ENST00000300933 MTTPP55157 894 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 ADARP55265 1226 aaKnown RBP21.83■■□□□ 1.08
TPM4-201ENST00000300933 SLC14A2Q15849 920 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 ALG1LQ6GMV1 187 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 USP13Q92995 863 aaPredicted RBP21.83■■□□□ 1.08
TPM4-201ENST00000300933 TMA16Q96EY4 203 aaKnown RBP21.83■■□□□ 1.08
TPM4-201ENST00000300933 LRGUKQ96M69 825 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 COPS7BQ9H9Q2 264 aaPredicted RBP21.83■■□□□ 1.08
TPM4-201ENST00000300933 ARHGAP26Q9UNA1 814 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 MED16Q9Y2X0 877 aa21.83■■□□□ 1.08
TPM4-201ENST00000300933 MYOFQ9NZM1 2061 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 ANKRD66B4E2M5 251 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 H3BSA7 217 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 SMAD6O43541 496 aaKnown RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 NPHS1O60500 1241 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 ESAMQ96AP7 390 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 CNDP1Q96KN2 507 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 RBM38Q9H0Z9 239 aaKnown RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 GSTO2Q9H4Y5 243 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 HEMK1Q9Y5R4 338 aaPredicted RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 A0A1B0GTL3 188 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 A0A1B0GTW7 788 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 SRP72O76094 671 aaKnown RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 WISP3O95389 354 aaPredicted RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 ZNF37AP17032 561 aaPredicted RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 PKNOX1P55347 436 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 PTPRNQ16849 979 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 SETMARQ53H47 684 aaPredicted RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 ZRANB3Q5FWF4 1079 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 METTL21CQ5VZV1 264 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 SETD3Q86TU7 594 aaPredicted RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 CAMK1DQ8IU85 385 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 PTGR2Q8N8N7 351 aaPredicted RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 OVCA2Q8WZ82 227 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 NPAS2Q99743 824 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 Q9H521 79 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 FBRSL1Q9HCM7 1045 aaKnown RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 SARS2Q9NP81 518 aaKnown RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 NLE1Q9NVX2 485 aaPredicted RBP21.82■■□□□ 1.08
TPM4-201ENST00000300933 PSMD13Q9UNM6 376 aa21.82■■□□□ 1.08
TPM4-201ENST00000300933 NDUFS3O75489 264 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 ENO3P13929 434 aaPredicted RBP21.81■■□□□ 1.08
TPM4-201ENST00000300933 GABRR2P28476 465 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 EPHB3P54753 998 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 DNAJB13P59910 316 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 CDH18Q13634 790 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 CYLC2Q14093 348 aaPredicted RBP21.81■■□□□ 1.08
TPM4-201ENST00000300933 RBM12BQ8IXT5 1001 aaKnown RBP21.81■■□□□ 1.08
TPM4-201ENST00000300933 PAF1Q8N7H5 531 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 VPS51Q9UID3 782 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 COL4A6Q14031 1691 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 C2orf81A6NN90 581 aa21.81■■□□□ 1.08
TPM4-201ENST00000300933 BNIP3LO60238 219 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms