RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ARL14EPQ8N8R7 260 aaPredicted RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 CALML6Q8TD86 181 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 MYLIPQ8WY64 445 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 RPL10LQ96L21 214 aaKnown RBP10.07□□□□□ -0.8
FOXN4-201ENST00000299162 C1orf74Q96LT6 269 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 PRKD2Q9BZL6 878 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 PCDHAC1Q9H158 963 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 Q9H521 79 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ANKRD6Q9Y2G4 727 aa10.07□□□□□ -0.8
FOXN4-201ENST00000299162 ARHGAP10A1A4S6 786 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TPST1O60507 370 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 NIPSNAP2O75323 286 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CRTAMO95727 393 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 APOA4P06727 396 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CST5P28325 142 aaPredicted RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 FOXA1P55317 472 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 SMAD3P84022 425 aaKnown RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 BFSP2Q13515 415 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 FLOT2Q14254 428 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 PTPRNQ16849 979 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 PLA2G4EQ3MJ16 856 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 HECTD3Q5T447 861 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 IFNEQ86WN2 208 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 NPAS4Q8IUM7 802 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 KDM1BQ8NB78 822 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 KYQ8NBH2 561 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 ANKK1Q8NFD2 765 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 OR4L1Q8NH43 312 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 EME1Q96AY2 570 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 NACC2Q96BF6 587 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CATSPERZQ9NTU4 200 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 FKBPLQ9UIM3 349 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 NYNRINQ9P2P1 1898 aaKnown RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 MYO16Q9Y6X6 1858 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 A0A1B0GTL3 188 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TMEM114B3SHH9 223 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 H3BMM5 538 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TMX2-CTNND1H3BSU7 103 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 DNAJA2O60884 412 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TBL1XO60907 577 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 LINC00032P0C843 101 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 PPARGP37231 505 aaPredicted RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 LRP8Q14114 963 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 FAM26DQ5JW98 314 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 ZNF549Q6P9A3 640 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 ANKS3Q6ZW76 656 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 ZNF683Q8IZ20 524 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 DIS3LQ8TF46 1054 aaKnown RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 PRICKLE1Q96MT3 831 aaPredicted RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 WDR41Q9HAD4 459 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TRPM5Q9NZQ8 1165 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 V9GYQ6 96 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CDC7O00311 574 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 BTN3A1O00481 513 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CACNG3O60359 315 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 OXSR1O95747 527 aaPredicted RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 ACRP10323 421 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 AGTR2P50052 363 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CYP4F8P98187 520 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 IL10RBQ08334 325 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TSNQ15631 228 aaKnown RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TECRLQ5HYJ1 363 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 RARS2Q5T160 578 aaKnown RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 MRNIPQ6NTE8 343 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 UGT2A3Q6UWM9 527 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CLVS1Q8IUQ0 354 aaPredicted RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 BBS5Q8N3I7 341 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 BHLHE22Q8NFJ8 381 aaPredicted RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 GAB3Q8WWW8 586 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 CDK15Q96Q40 435 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 GPR21Q99679 349 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TNKS2Q9H2K2 1166 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 AGO1Q9UL18 857 aaKnown RBP10.06□□□□□ -0.8
FOXN4-201ENST00000299162 TSC22D4Q9Y3Q8 395 aa10.06□□□□□ -0.8
FOXN4-201ENST00000299162 RGSL1A5PLK6 1076 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 NPEPPSL1A6NEC2 478 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 UBFD1O14562 309 aaKnown RBP10.05□□□□□ -0.8
FOXN4-201ENST00000299162 PRAMEF11O60813 436 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 GUCA1CO95843 209 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 RPLP2P05387 115 aaKnown RBP10.05□□□□□ -0.8
FOXN4-201ENST00000299162 CKMP06732 381 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 THRAP10827 490 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 IDO1P14902 403 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 EMP3P54852 163 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 FAM189BP81408 668 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 RPS6KA2Q15349 733 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 OR4D1Q15615 310 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 TBCCQ15814 346 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 PIANPQ8IYJ0 282 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 FBXW8Q8N3Y1 598 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 SIDT2Q8NBJ9 832 aaKnown RBP10.05□□□□□ -0.8
FOXN4-201ENST00000299162 RIN3Q8TB24 985 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 TMEM169Q96HH4 297 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 CDKN2AIPNLQ96HQ2 116 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 C3orf30Q96M34 536 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 VPS45Q9NRW7 570 aa10.05□□□□□ -0.8
FOXN4-201ENST00000299162 OLA1Q9NTK5 396 aaKnown RBP10.05□□□□□ -0.8
FOXN4-201ENST00000299162 RNF112Q9ULX5 631 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms