RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CHST15Q7LFX5 561 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ATCAYQ86WG3 371 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF433Q8N7K0 673 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SRFBP1Q8NEF9 429 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 OR8H1Q8NGG4 311 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 VANGL1Q8TAA9 524 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PPP1R13LQ8WUF5 828 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 C11orf24Q96F05 449 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SEC14L4Q9UDX3 406 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 A8MUI8 341 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 XYLBO75191 536 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 OR7A10O76100 309 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ARF3P61204 181 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ARF1P84077 181 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 RAP1GAP2Q684P5 730 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CREG2Q8IUH2 290 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TBC1D15Q8TC07 691 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PPP3R2Q96LZ3 170 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PNMA5Q96PV4 448 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SLC4A9Q96Q91 983 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 BLOC1S4Q9NUP1 217 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF490Q9ULM2 529 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TNFSF13BQ9Y275 285 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CLCA1A8K7I4 914 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 H0YJX3 145 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 HERC3Q15034 1050 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF410Q86VK4 478 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ARMC10Q8N2F6 343 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 KCTD4Q8WVF5 259 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TCF12Q99081 682 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CIB1Q99828 191 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 C2orf49Q9BVC5 232 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SEMA3GQ9NS98 782 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PCYOX1Q9UHG3 505 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 A0A0U1RQJ8 604 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ULK1O75385 1050 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 MATN4O95460 622 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SEPHS1P49903 392 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CARTPTQ16568 116 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 LSM12Q3MHD2 195 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PLCZ1Q86YW0 608 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 DENND6BQ8NEG7 585 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 OR10G6Q8NH81 332 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GFM1Q96RP9 751 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 MCMBPQ9BTE3 642 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ACE2Q9BYF1 805 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 NEUROD4Q9HD90 331 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 IFT46Q9NQC8 304 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 EXD2Q9NVH0 621 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PRPF19Q9UMS4 504 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 URADA6NGE7 173 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TISP43B9A030 160 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PIAS1O75925 651 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 DNAJB5O75953 348 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ITGA2BP08514 1039 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CDK9P50750 372 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GJA9P57773 515 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SLC30A6Q6NXT4 461 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SPPL2CQ8IUH8 684 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 FAM47BQ8NA70 645 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SOCS4Q8WXH5 440 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZBTB45Q96K62 511 aaPredicted RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 MARCH7Q9H992 704 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 NKIRAS2Q9NYR9 191 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PCDHGB3Q9Y5G1 929 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TRAV19A0A0A6YYK7 116 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ANKRD63C9JTQ0 380 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 PIRTP0C851 137 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GIMD1P0DJR0 217 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 GOT1P17174 413 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 POLR2JP52435 117 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SLC12A3P55017 1021 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZC3H12AQ5D1E8 599 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 WDR59Q6PJI9 974 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TMPRSS11AQ6ZMR5 421 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 RGL4Q8IZJ4 473 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CXorf40BQ96DE9 158 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 RBM4BQ9BQ04 359 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 RBM4Q9BWF3 364 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF446Q9NWS9 450 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 TAS2R14Q9NYV8 317 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 RPTORQ8N122 1335 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SLITRK3O94933 977 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CTPS1P17812 591 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ITGA7Q13683 1181 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 AUHQ13825 339 aaKnown RBP5.54□□□□□ -1.52
CPSF2-201ENST00000298875 FKBP1CQ5VVH2 108 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 UBE2J2Q8N2K1 259 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 CHIAQ9BZP6 476 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 ACSS2Q9NR19 701 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 MARCH2Q9P0N8 246 aa5.54□□□□□ -1.52
CPSF2-201ENST00000298875 SIGLEC16A6NMB1 481 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 PRH1P02810 166 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 CCR3P51677 355 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 SNAPC1Q16533 368 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 KCTD19Q17RG1 926 aaPredicted RBP5.53□□□□□ -1.52
CPSF2-201ENST00000298875 TMEM44Q2T9K0 475 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 CMPK2Q5EBM0 449 aa5.53□□□□□ -1.52
CPSF2-201ENST00000298875 ADGRA1Q86SQ6 560 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms