RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 RAD18Q9NS91 495 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 CMTM6Q9NX76 183 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 VWA7Q9Y334 891 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 PCDHA2Q9Y5H9 948 aa17.46■□□□□ 0.39
PCDHA13-201ENST00000289272 KCNU1A8MYU2 1149 aa17.46■□□□□ 0.38
PCDHA13-201ENST00000289272 PRKD3O94806 890 aa17.46■□□□□ 0.38
PCDHA13-201ENST00000289272 EPB42P16452 691 aa17.46■□□□□ 0.38
PCDHA13-201ENST00000289272 PWP1Q13610 501 aa17.46■□□□□ 0.38
PCDHA13-201ENST00000289272 PIGZQ86VD9 579 aa17.46■□□□□ 0.38
PCDHA13-201ENST00000289272 LRRC52Q8N7C0 313 aa17.46■□□□□ 0.38
PCDHA13-201ENST00000289272 MED28Q9H204 178 aa17.46■□□□□ 0.38
PCDHA13-201ENST00000289272 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 IGSF6O95976 241 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 GNAZP19086 355 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 PTSQ03393 145 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 TFAP2DQ7Z6R9 452 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CRELD1Q96HD1 420 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 ZNF558Q96NG5 402 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 OR12D3Q9UGF7 316 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 A0A1W2PQ72 361 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CBX4O00257 560 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 ITM2AO43736 263 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 ABATP80404 500 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 PLCL1Q15111 1095 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 METTL3Q86U44 580 aaKnown RBP17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 TMEM199Q8N511 208 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 PPTC7Q8NI37 304 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 DNAJC1Q96KC8 554 aaKnown RBP17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CNOT6Q9ULM6 557 aaKnown RBP17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 PHF24Q9UPV7 400 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 NR2E3Q9Y5X4 410 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 PTCH2Q9Y6C5 1203 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 DGKBQ9Y6T7 804 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 ELOVL7A1L3X0 281 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 PGRP06401 933 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CYP2A6P11509 494 aaPredicted RBP17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CRADDP78560 199 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 DNAJC14Q6Y2X3 702 aaPredicted RBP17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CCDC185Q8N715 623 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CAB39LQ9H9S4 337 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 COL20A1Q9P218 1284 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 PPM1HQ9ULR3 514 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CCDC189A1A4V9 331 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 DENRO43583 198 aaKnown RBP17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CHRM1P11229 460 aaPredicted RBP17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 MED22Q15528 200 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 TRIM40Q6P9F5 258 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 MOSPD2Q8NHP6 518 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 DCAKDQ8WVC6 231 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 ATP13A1Q9HD20 1204 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 ST3GAL5Q9UNP4 418 aa17.45■□□□□ 0.38
PCDHA13-201ENST00000289272 CHRNB2P17787 502 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 GRM5P41594 1212 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 MAPK8P45983 427 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 AP3S2P59780 193 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 CYP4X1Q8N118 509 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 SELENOMQ8WWX9 145 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 PRLP01236 227 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 ZBTB48P10074 688 aaPredicted RBP17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 ARL13AQ5H913 290 aaPredicted RBP17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 WSCD1Q658N2 575 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 TIFABQ6ZNK6 161 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 PTCHD4Q6ZW05 846 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 PTGFRNQ9P2B2 879 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 SNED1Q8TER0 1413 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 C2orf71A6NGG8 1288 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 BCAS2O75934 225 aaPredicted RBP17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 IL1BP01584 269 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 CDH1P12830 882 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 SMARCB1Q12824 385 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 DAG1Q14118 895 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 CENPSQ8N2Z9 138 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 TDRKHQ9Y2W6 561 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 PIAS1O75925 651 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 IFNA7P01567 189 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 PROZP22891 400 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 OR1E1P30953 314 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 SLC35G1Q2M3R5 365 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 GAD1Q99259 594 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 NIFKQ9BYG3 293 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 RIPK3Q9Y572 518 aa17.44■□□□□ 0.38
PCDHA13-201ENST00000289272 FABP3P05413 133 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 POLR2LP62875 67 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 PRKCQQ04759 706 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 SMG8Q8ND04 991 aaKnown RBP17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 CLEC4DQ8WXI8 215 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 ATXN3LQ9H3M9 355 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 ILVBLA1L0T0 632 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 H3BSA7 217 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 BDNFP23560 247 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 FMO4P31512 558 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 PPM1AP35813 382 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 MYBPC3Q14896 1274 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 RASSF6Q6ZTQ3 369 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 GLB1L3Q8NCI6 653 aaPredicted RBP17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 OR8H1Q8NGG4 311 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 TRPM4Q8TD43 1214 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 FEM1CQ96JP0 617 aa17.43■□□□□ 0.38
PCDHA13-201ENST00000289272 SEZ6LQ9BYH1 1024 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms