RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SEPT10Q9P0V9 454 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 PCDHB11Q9Y5F2 797 aa9.11□□□□□ -0.95
HMGN1-201ENST00000288344 OAS3Q9Y6K5 1087 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 ZFC3H1O60293 1989 aaKnown RBP9.11□□□□□ -0.95
HMGN1-201ENST00000288344 UNC13CQ8NB66 2214 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 C1orf232A0A0U1RR37 186 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 EME2A4GXA9 379 aaPredicted RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 USP27XA6NNY8 438 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 ENC1O14682 589 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CASC3O15234 703 aaKnown RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 KCNN4O15554 427 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 AQP9O43315 295 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 LDB2O43679 373 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 DNAJC6O75061 913 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 LDOC1O95751 146 aaPredicted RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 PCCBP05166 539 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 IVLP07476 585 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CKMT2P17540 419 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 HLA-DPA1P20036 260 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 PSMB4P28070 264 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 POLD2P49005 469 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 PPARDQ03181 441 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 ILKQ13418 452 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 C1orf61Q13536 156 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 ARHGEF7Q14155 803 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 KHDC1Q4VXA5 237 aaKnown RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 PYCR3Q53H96 274 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CDCP2Q5VXM1 449 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 XKR5Q6UX68 686 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CCNI2Q6ZMN8 369 aaPredicted RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 KDELC2Q7Z4H8 507 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CDKL3Q8IVW4 592 aaPredicted RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 SFTPA2Q8IWL1 248 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CHCHD4Q8N4Q1 142 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 PRELID2Q8N945 189 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 FAM71DQ8N9W8 422 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 GPR156Q8NFN8 814 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CCL4L1Q8NHW4 92 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 BTN2A2Q8WVV5 523 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 GATA6Q92908 595 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CNDP2Q96KP4 475 aaKnown RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 APOLD1Q96LR9 279 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 SRPK1Q96SB4 655 aaKnown RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 TMEM168Q9H0V1 697 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 FAM83DQ9H4H8 585 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 TRABDQ9H4I3 376 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 HAUS2Q9NVX0 235 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 TRNAU1APQ9NX07 287 aaKnown RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 KLHL8Q9P2G9 620 aaPredicted RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 CD84Q9UIB8 345 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 SHOC2Q9UQ13 582 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 ZNF711Q9Y462 761 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 JRKLQ9Y4A0 524 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 MAP4K5Q9Y4K4 846 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 TTLL3Q9Y4R7 772 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 MYLKQ15746 1914 aa9.1□□□□□ -0.95
HMGN1-201ENST00000288344 ZNF106Q9H2Y7 1883 aaKnown RBP9.1□□□□□ -0.95
HMGN1-201ENST00000288344 PRSS38A1L453 326 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 NEMP2A6NFY4 417 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 CHUKO15111 745 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 SIAH2O43255 324 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 NOBOXO60393 691 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 ZNF189O75820 626 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-201ENST00000288344 SUN1O94901 812 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 RASGRP1O95267 797 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 TRIM16O95361 564 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 MYF5P13349 255 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 ETS1P14921 441 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 CA4P22748 312 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 NFKBIAP25963 317 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 CETN2P41208 172 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 SCTRP47872 440 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 ATP1A2P50993 1020 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 THOP1P52888 689 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 EPHB1P54762 984 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 XIAPP98170 497 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 PTPRCAPQ14761 206 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 PCSK7Q16549 785 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 CYP1B1Q16678 543 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 PRRT3Q5FWE3 981 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 C11orf96Q7Z7L8 435 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 PRUNE1Q86TP1 453 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 SLC35F3Q8IY50 421 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 BRSK1Q8TDC3 778 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 C1orf54Q8WWF1 131 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 HIC2Q96JB3 615 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 CDK15Q96Q40 435 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 DUSP23Q9BVJ7 150 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 SCNM1Q9BWG6 230 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 CDH19Q9H159 772 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 WDR26Q9H7D7 661 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 SPATS2LQ9NUQ6 558 aaKnown RBP9.09□□□□□ -0.95
HMGN1-201ENST00000288344 SPASTQ9UBP0 616 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 GULP1Q9UBP9 304 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 APOBEC3BQ9UH17 382 aaKnown RBP9.09□□□□□ -0.95
HMGN1-201ENST00000288344 RSPH14Q9UHP6 348 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 PYCARDQ9ULZ3 195 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 ZKSCAN5Q9Y2L8 839 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
HMGN1-201ENST00000288344 MSRB2Q9Y3D2 182 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms