RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GPATCH1Q9BRR8 931 aaKnown RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 UNKQ9C0B0 810 aaKnown RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PCDHAC1Q9H158 963 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 COQ10BQ9H8M1 238 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 SP110Q9HB58 689 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TNFRSF12AQ9NP84 129 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 NT5MQ9NPB1 228 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 ABCD2Q9UBJ2 740 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TMCO1Q9UM00 188 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PCDHB8Q9UN66 801 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 LDB2O43679 373 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 OR6B1O95007 311 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 MATN4O95460 622 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 H6PDO95479 791 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 IL9P15248 144 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 CD1DP15813 335 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 ZNF23P17027 643 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 HLA-DPA1P20036 260 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 OGNP20774 298 aaKnown RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 GPX3P22352 226 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 MRPL19P49406 292 aaKnown RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 RPS6KA3P51812 740 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 FOXM1Q08050 763 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 DSC1Q08554 894 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 BNIP2Q12982 314 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PARP15Q460N3 678 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 C6orf10Q5SRN2 563 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 GPR158Q5T848 1215 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 ZNF280DQ6N043 979 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PPP4R4Q6NUP7 873 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TAS1R1Q7RTX1 841 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 KDELC2Q7Z4H8 507 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PTAR1Q7Z6K3 402 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 MINDY1Q8N5J2 469 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 OR2T34Q8NGX1 318 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 OR6P1Q8NGX9 317 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 OR2T3Q8NH03 318 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 ZFP28Q8NHY6 868 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 HM13Q8TCT9 377 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 HDAC10Q969S8 669 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 SLCO4A1Q96BD0 722 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PABPC5Q96DU9 382 aaKnown RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 HMCESQ96FZ2 354 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 C8orf48Q96LL4 319 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TMEM209Q96SK2 561 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 TFB2MQ9H5Q4 396 aaKnown RBP12.87□□□□□ -0.35
C9orf3-201ENST00000277198 ALG9Q9H6U8 611 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 NMUR1Q9HB89 426 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 PNPLA3Q9NST1 481 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 APPL1Q9UKG1 709 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
C9orf3-201ENST00000277198 A0A1W2PQH9 124 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 C7orf72A4D263 438 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 HNRNPRO43390 633 aaKnown RBP12.86□□□□□ -0.35
C9orf3-201ENST00000277198 MOCS2O96007 188 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ASLP04424 464 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 FGF1P05230 155 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 C7P10643 843 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 HSD17B1P14061 328 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ETS2P15036 469 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 PPM1AP35813 382 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 PLK1P53350 603 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 CDKN2DP55273 166 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 TBX4P57082 545 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ATP6V0D1P61421 351 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 UBE3AQ05086 875 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ITKQ08881 620 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 SLC10A7Q0GE19 358 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 NFE2Q16621 373 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-201ENST00000277198 SIRPB2Q5JXA9 342 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 IYDQ6PHW0 289 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 TMEM207Q6UWW9 146 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 DCP1BQ8IZD4 617 aaKnown RBP12.86□□□□□ -0.35
C9orf3-201ENST00000277198 NUP93Q8N1F7 819 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 LRTOMTQ8WZ04 291 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 NMD3Q96D46 503 aaKnown RBP12.86□□□□□ -0.35
C9orf3-201ENST00000277198 TMEM169Q96HH4 297 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 FEM1CQ96JP0 617 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 B3GALT6Q96L58 329 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ANKRD60Q9BZ19 345 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 TIMMDC1Q9NPL8 285 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 CCM2LQ9NUG4 571 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-201ENST00000277198 CLEC1BQ9P126 229 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 ATXN10Q9UBB4 475 aa12.86□□□□□ -0.35
C9orf3-201ENST00000277198 DRGXA6NNA5 263 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 TMCC1O94876 653 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 ATXN1LP0C7T5 689 aaKnown RBP12.85□□□□□ -0.35
C9orf3-201ENST00000277198 CA8P35219 290 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 OR1G1P47890 313 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 YBEYP58557 167 aaPredicted RBP12.85□□□□□ -0.35
C9orf3-201ENST00000277198 MYLK3Q32MK0 819 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 MS4A13Q5J8X5 152 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 INTS11Q5TA45 600 aaKnown RBP12.85□□□□□ -0.35
C9orf3-201ENST00000277198 ERMP1Q7Z2K6 904 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 ARHGAP22Q7Z5H3 698 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 FUNDC1Q8IVP5 155 aa12.85□□□□□ -0.35
C9orf3-201ENST00000277198 MIER2Q8N344 545 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms