RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ZNF607Q96SK3 696 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 HBS1LQ9Y450 684 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 DCCP43146 1447 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 ARHGAP23Q9P227 1491 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 MYBPHLA2RUH7 354 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 GRM6O15303 877 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 PSIP1O75475 530 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 SIM2Q14190 667 aaPredicted RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 TAB1Q15750 504 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 LSM12Q3MHD2 195 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 LRRC73Q5JTD7 316 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 EEF1AKMT1Q8WVE0 214 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 ZNF354BQ96LW1 612 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 BRINP2Q9C0B6 783 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 MAPRE3Q9UPY8 281 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 CORO2BQ9UQ03 480 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 FCF1Q9Y324 198 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 ZFP37Q9Y6Q3 630 aaPredicted RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 AGLP35573 1532 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 C5orf60A6NFR6 353 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 KCNU1A8MYU2 1149 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 MPPE1Q53F39 396 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 CAPN13Q6MZZ7 669 aaPredicted RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 MZT2AQ6P582 158 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 RPTNQ6XPR3 784 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 LBX2Q6XYB7 198 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 ARHGAP22Q7Z5H3 698 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 YTHDF3Q7Z739 585 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 DEPDC4Q8N2C3 294 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 SLC4A11Q8NBS3 891 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 FAM98AQ8NCA5 519 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 UPF1Q92900 1129 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP53-201ENST00000274030 FAM192AQ9GZU8 254 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 RPRD1BQ9NQG5 326 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 PSMD13Q9UNM6 376 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 SH3GLB1Q9Y371 365 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 FAM149AA5PLN7 773 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 TAF4O00268 1085 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 SIN3BO75182 1162 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 PCCBP05166 539 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 IQCKQ8N0W5 287 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 PIH1D2Q8WWB5 315 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 SLC9A7Q96T83 725 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 DERAQ9Y315 318 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 MCIDASD6RGH6 385 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 DHX15O43143 795 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 CHRNGP07510 517 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 CCT3P49368 545 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 PLEKHG4Q58EX7 1191 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 RNASE12Q5GAN4 147 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 INTS6LQ5JSJ4 861 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 CCNYL2Q5T2Q4 361 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 ESRP1Q6NXG1 681 aaKnown RBP11.42□□□□□ -0.58
USP53-201ENST00000274030 ZNF567Q8N184 647 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 OR52J3Q8NH60 311 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 CAPSLQ8WWF8 208 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 RHOBTB2Q9BYZ6 727 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 LRTM1Q9HBL6 345 aa11.42□□□□□ -0.58
USP53-201ENST00000274030 CLUHO75153 1309 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CRHR1P34998 444 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 GNPDA1P46926 289 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CLK3P49761 638 aaKnown RBP11.41□□□□□ -0.58
USP53-201ENST00000274030 SMIM11AP58511 58 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 ARL13AQ5H913 290 aaPredicted RBP11.41□□□□□ -0.58
USP53-201ENST00000274030 ANXA8L1Q5VT79 327 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CHST9Q7L1S5 443 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CDH24Q86UP0 819 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CFAP206Q8IYR0 622 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 SLC34A3Q8N130 599 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 RASGEF1CQ8N431 466 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 OR14C36Q8NHC7 312 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 SMG7Q92540 1137 aaKnown RBP11.41□□□□□ -0.58
USP53-201ENST00000274030 MCRS1Q96EZ8 462 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 HMCESQ96FZ2 354 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 ABCG4Q9H172 646 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 IPPKQ9H8X2 491 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 MAP4K5Q9Y4K4 846 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 ROBO3Q96MS0 1386 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CAPN8A6NHC0 703 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 USP2O75604 605 aaPredicted RBP11.41□□□□□ -0.58
USP53-201ENST00000274030 PRAMEF1O95521 474 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 PSMD4P55036 377 aaKnown RBP11.41□□□□□ -0.58
USP53-201ENST00000274030 ARF5P84085 180 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 FAM110CQ1W6H9 321 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 GLYATQ6IB77 296 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 VSTM1Q6UX27 236 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 ZNF563Q8TA94 476 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CD99L2Q8TCZ2 262 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 TWIST2Q8WVJ9 160 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 PTPN18Q99952 460 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 ARHGEF4Q9NR80 690 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 MCUBQ9NWR8 336 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 ZNF541Q9H0D2 1346 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 NDST3O95803 873 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 ALAS2P22557 587 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CES1P23141 567 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 NMBRP28336 390 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 CTSKP43235 329 aa11.41□□□□□ -0.58
USP53-201ENST00000274030 NR1H2P55055 460 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms