RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 RHOBTB2Q9BYZ6 727 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 OGDHLQ9ULD0 1010 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 PDE10AQ9Y233 779 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 KLHL20Q9Y2M5 609 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 WBP11Q9Y2W2 641 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 OR4Q2P0C623 313 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 AQP1P29972 269 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 TALDO1P37837 337 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 SLC26A3P40879 764 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 CDK9P50750 372 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 BOP1Q14137 746 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 ANGPT1Q15389 498 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 CPSF6Q16630 551 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 FAM187BQ17R55 369 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 ZFP69Q49AA0 526 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 HECTD2Q5U5R9 776 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 MBLAC2Q68D91 279 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 OR52E8Q6IFG1 317 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 USP50Q70EL3 339 aaPredicted RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 NKAPQ8N5F7 415 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 HM13Q8TCT9 377 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 NACC2Q96BF6 587 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 FBXL20Q96IG2 436 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 PCYT2Q99447 389 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 CCDC106Q9BWC9 280 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 IFT80Q9P2H3 777 aaPredicted RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 MYL12BO14950 172 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 PRKCHP24723 683 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 TKTP29401 623 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 CLCNKBP51801 687 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 PCLAFQ15004 111 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 PSMD5Q16401 504 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 TIMM50Q3ZCQ8 353 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 RETSATQ6NUM9 610 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 ZCCHC8Q6NZY4 707 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 SLC35F5Q8WV83 523 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 TRMOQ9BU70 441 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 MARCH7Q9H992 704 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 EIF2B3Q9NR50 452 aaKnown RBP11.51□□□□□ -0.57
VPS33A-201ENST00000267199 MAGEL2Q9UJ55 1249 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 NENFQ9UMX5 172 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 SLC27A5Q9Y2P5 690 aa11.51□□□□□ -0.57
VPS33A-201ENST00000267199 BBIP1A8MTZ0 92 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 HDCP19113 662 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 POLD2P49005 469 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 RPS7P62081 194 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ELAVL2Q12926 359 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 MAP2K5Q13163 448 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TARBP2Q15633 366 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 P2RY8Q86VZ1 359 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 KRT73Q86Y46 540 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 FAM9CQ8IZT9 166 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 MCOLN3Q8TDD5 553 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 RAB2BQ8WUD1 216 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TEPSINQ96N21 525 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 SOX17Q9H6I2 414 aaPredicted RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 PIGVQ9NUD9 493 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TOR4AQ9NXH8 423 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CACNG4Q9UBN1 327 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 BCKDKO14874 412 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 PIP5K1BO14986 540 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 RSL1D1O76021 490 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 SMPD1P17405 629 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CES1P23141 567 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 PGGT1BP53609 377 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TRIM32Q13049 653 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ZNF549Q6P9A3 640 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CAND1Q86VP6 1230 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 SYT12Q8IV01 421 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CENPSQ8N2Z9 138 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 SLC9A7Q96T83 725 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 AMBNQ9NP70 447 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 DYRK4Q9NR20 520 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CYTH4Q9UIA0 394 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ULK1O75385 1050 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 EPN2O95208 641 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 GPC1P35052 558 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CHRNA4P43681 627 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ZNF252P-AS1Q0IIN9 211 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TSNQ15631 228 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TAB1Q15750 504 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 INTS6LQ5JSJ4 861 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 UBE2J2Q8N2K1 259 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 UXS1Q8NBZ7 420 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 GATA6Q92908 595 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TBATAQ96M53 351 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 OR52E6Q96RD3 313 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 TRIM45Q9H8W5 580 aaPredicted RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 GIT1Q9Y2X7 761 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 ST14Q9Y5Y6 855 aa11.5□□□□□ -0.57
VPS33A-201ENST00000267199 PRRC2BQ5JSZ5 2229 aaKnown RBP11.5□□□□□ -0.57
VPS33A-201ENST00000267199 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms