RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 DGAT2L6Q6ZPD8 337 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 TAOK1Q7L7X3 1001 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 KDELC2Q7Z4H8 507 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 KLHDC8AQ8IYD2 350 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 FSTL5Q8N475 847 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 BARD1Q99728 777 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CALN1Q9BXU9 219 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 FAM204AQ9H8W3 233 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 CYP4F11Q9HBI6 524 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 PPT2Q9UMR5 302 aa5.59□□□□□ -1.51
TOPBP1-201ENST00000260810 LEFTY1O75610 366 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 ETV3P41162 512 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 HARS2P49590 506 aaKnown RBP5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 DBN1Q16643 649 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 GLE1Q53GS7 698 aaKnown RBP5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 LIPIQ6XZB0 460 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 LRRC34Q8IZ02 419 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF781Q8N8C0 355 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 EGLN2Q96KS0 407 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 RUNDC3BQ96NL0 473 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 SEPT5Q99719 369 aaPredicted RBP5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 GPATCH1Q9BRR8 931 aaKnown RBP5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 SPRY4Q9C004 299 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 ECT2Q9H8V3 914 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 RAPGEFL1Q9UHV5 662 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 TCAF1Q9Y4C2 921 aa5.59□□□□□ -1.52
TOPBP1-201ENST00000260810 CENPVL1A0A0U1RR11 272 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC5A10A0PJK1 596 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 CREB3O43889 395 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 LUC7L3O95232 432 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 KRT1P04264 644 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SEMG1P04279 462 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 APRTP07741 180 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 GNAT1P11488 350 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 RAG1P15918 1043 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 HOXD11P31277 338 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 HNRNPFP52597 415 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 WSCD2Q2TBF2 565 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 AP1ARQ63HQ0 302 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TMCO3Q6UWJ1 677 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 CERS6Q6ZMG9 384 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TBC1D1Q86TI0 1168 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ALYREFQ86V81 257 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 PARGQ86W56 976 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 CCDC71Q8IV32 467 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TMEM105Q8N8V8 129 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TERB1Q8NA31 727 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 URGCPQ8TCY9 931 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 NXNL1Q96CM4 212 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SCRN2Q96FV2 425 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC38A7Q9NVC3 462 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ABCA12Q86UK0 2595 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 A8MX80 341 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ACOT8O14734 319 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF26P17031 533 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ACVR2AP27037 513 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 NDST2P52849 883 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TNNC1P63316 161 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 CLCA4Q14CN2 919 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 PDK2Q15119 407 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SPDYCQ5MJ68 293 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 DBX2Q6ZNG2 339 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 PRSS41Q7RTY9 318 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 GALNT7Q86SF2 657 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TMEM121BQ9BXQ6 578 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SLC25A51Q9H1U9 297 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TANC2Q9HCD6 1990 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 NSD1Q96L73 2696 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 LRRK2Q5S007 2527 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ILVBLA1L0T0 632 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SPECC1L-ADORA2AF8WAN1 911 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 CCDC188H7C350 402 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SNX3O60493 162 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 USP1O94782 785 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 GOT2P00505 430 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 MYF5P13349 255 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 NDUFV2P19404 249 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SELPLGQ14242 412 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 GK3PQ14409 553 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 C3orf62Q6ZUJ4 267 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 DCBLD1Q8N8Z6 715 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 HEXDCQ8WVB3 486 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 CLDN23Q96B33 292 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 FOXQ1Q9C009 403 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 SIK2Q9H0K1 926 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 RSPH9Q9H1X1 276 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 OR52A5Q9H2C5 316 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 CFAP97Q9P2B7 532 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ZNF624Q9P2J8 865 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 STRIP2Q9ULQ0 834 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 TMEM200CA6NKL6 621 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 H0YHG0 523 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 DKK1O94907 266 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 PYGBP11216 843 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 IGFALSP35858 605 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 MAP3K8P41279 467 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 GALK1P51570 392 aa5.58□□□□□ -1.52
TOPBP1-201ENST00000260810 FAM193AP78312 1265 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms