RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 PRR5P85299 388 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ST3GAL4Q11206 333 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RUNX3Q13761 415 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 PTPRCAPQ14761 206 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 TREML2Q5T2D2 321 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ZNF618Q5T7W0 954 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ACAD10Q6JQN1 1059 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 FAM173BQ6P4H8 233 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 TMEM26Q6ZUK4 368 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 KRT74Q7RTS7 529 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MTDHQ86UE4 582 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 ZNF589Q86UQ0 364 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 ATP6V1C2Q8NEY4 427 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 OTUD7AQ8TE49 926 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 DAZLQ92904 295 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 ZBTB9Q96C00 473 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 GRAMD1AQ96CP6 724 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 FRMD6Q96NE9 622 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 TRIM8Q9BZR9 551 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 EPHX3Q9H6B9 360 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 KCNK13Q9HB14 408 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 CHMP1AQ9HD42 196 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 MORF4L1Q9UBU8 362 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MGAT4AQ9UM21 535 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 KIF1BO60333 1816 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 A0A0G2JND7 137 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 GLYATL1P3A0A0U1RQE8 302 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 PP2D1A8MPX8 630 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 G3V2T6 193 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 PPEF2O14830 753 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 CPN2P22792 545 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RCVRNP35243 200 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 BRCC3P46736 316 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 GLRBP48167 497 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ARFIP1P53367 373 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 C1QBPQ07021 282 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 NAB1Q13506 487 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RFTN1Q14699 578 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 HKDC1Q2TB90 917 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 TRIM61Q5EBN2 209 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 XKR6Q5GH73 641 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 TCTE1Q5JU00 501 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 OLFML2AQ68BL7 652 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 CCDC137Q6PK04 289 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 LRRC6Q86X45 466 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NATD1Q8N6N6 113 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 STAG3L4Q8TBR4 150 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NINJ1Q92982 152 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MKL1Q969V6 931 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ELMO3Q96BJ8 720 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 C12orf42Q96LP6 360 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 CCNL2Q96S94 520 aaPredicted RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 HNRNPABQ99729 332 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 HERPUD2Q9BSE4 406 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ANKZF1Q9H8Y5 726 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NANOGQ9H9S0 305 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RC3H2Q9HBD1 1191 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 GLOD4Q9HC38 313 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MRPS30Q9NP92 439 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 ABCB10Q9NRK6 738 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MAT2BQ9NZL9 334 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NDRG3Q9UGV2 375 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ADGRE2Q9UHX3 823 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RIMKLBQ9ULI2 386 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NRXN1Q9ULB1 1477 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 A0A1W2PPH5 198 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 A8MX80 341 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 C2orf74A8MZ97 194 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 WRBO00258 174 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 AREL1O15033 823 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 DTNBO60941 627 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 ACTL6BO94805 426 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 HAUS5O94927 633 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RLN1P04808 185 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 FAM163BP0C2L3 166 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 HOXB6P17509 224 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 TACR2P21452 398 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 FBLP22087 321 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 CYP2F1P24903 491 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MRPS21P82921 87 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 VAC14Q08AM6 782 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NDUFAF6Q330K2 333 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 GALNTL6Q49A17 601 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 KIAA1161Q6NSJ0 714 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 RFX8Q6ZV50 586 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 MMAAQ8IVH4 418 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 ATAD1Q8NBU5 361 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 PDPRQ8NCN5 879 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 CLHC1Q8NHS4 586 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.02□□□□□ -1.771e-9■■■■■ 40
RNF38-201ENST00000259605 SPPL2AQ8TCT8 520 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 WDR60Q8WVS4 1066 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 KAT2BQ92831 832 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 LPAR4Q99677 370 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 NOL6Q9H6R4 1146 aaKnown RBP4.02□□□□□ -1.77
RNF38-201ENST00000259605 TMEM184CQ9NVA4 438 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 SLC39A1Q9NY26 324 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 TMEM9Q9P0T7 183 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 GMIPQ9P107 970 aa4.02□□□□□ -1.77
RNF38-201ENST00000259605 PPP2R2CQ9Y2T4 447 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms