RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 GRK2P25098 689 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 RPL34P49207 117 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 LMAN2Q12907 356 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 ELAVL2Q12926 359 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PTK2BQ14289 1009 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 NR6A1Q15406 480 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 TMEM154Q6P9G4 183 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 DPY19L3Q6ZPD9 716 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 LRRC74BQ6ZQY2 392 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 RAB44Q7Z6P3 723 aaPredicted RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 TMPRSS6Q8IU80 811 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 DSELQ8IZU8 1212 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 METTL6Q8TCB7 284 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 LKAAEAR1Q8TD35 194 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PTCD3Q96EY7 689 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PPM1MQ96MI6 270 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PPCSQ9HAB8 311 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 WDR41Q9HAD4 459 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 FARSBQ9NSD9 589 aaKnown RBP9.05□□□□□ -0.96
CKAP2-201ENST00000258607 TAS2R13Q9NYV9 303 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 SLAMF8Q9P0V8 285 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 PSMD13Q9UNM6 376 aa9.05□□□□□ -0.96
CKAP2-201ENST00000258607 AHCTF1Q8WYP5 2266 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 MAGEB16A2A368 324 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 PGM3O95394 542 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CRTAMO95727 393 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 IGLV3-25P01717 112 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 MTHFD1P11586 935 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 LPOP22079 712 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 HTR6P50406 440 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 WDR5P61964 334 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 IL10RBQ08334 325 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ARHGEF6Q15052 776 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CHRNA6Q15825 494 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 Q6ZVL8 140 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 GET4Q7L5D6 327 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SZRD1Q7Z422 152 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 GALNT10Q86SR1 603 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SERPINA9Q86WD7 417 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 KBTBD2Q8IY47 623 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ARHGAP24Q8N264 748 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 UMODL1-AS1Q8N2C9 162 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ELMOD1Q8N336 334 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 FLCNQ8NFG4 579 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 PGAP3Q96FM1 320 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 NAF1Q96HR8 494 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 NOL11Q9H8H0 719 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 EIF2B3Q9NR50 452 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ASAH2Q9NR71 780 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 WWOXQ9NZC7 414 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ARHGAP26Q9UNA1 814 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 PRSS21Q9Y6M0 314 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SCN2AQ99250 2005 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 KNTC1P50748 2209 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 PABPN1LA6NDY0 278 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SAP18O00422 153 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 TRAFD1O14545 582 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ARHGEF15O94989 841 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CLIC3O95833 236 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ITGAXP20702 1163 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ATP5F1P24539 256 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SLC7A2P52569 658 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SULT2A1Q06520 285 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 UAP1L1Q3KQV9 507 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CRTC3Q6UUV7 619 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ZYG11AQ6WRX3 759 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 C11orf96Q7Z7L8 435 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 FAM124AQ86V42 546 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 LSMEM2Q8N112 164 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 PARP8Q8N3A8 854 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 RIN3Q8TB24 985 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SOX17Q9H6I2 414 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ZFYVE1Q9HBF4 777 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 VPS45Q9NRW7 570 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 OLA1Q9NTK5 396 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 MICAL3Q7RTP6 2002 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CACNA1GO43497 2377 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 DOCK9Q9BZ29 2069 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 GRID2O43424 1007 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SNNO75324 88 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 ECI2O75521 394 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 RPP40O75818 363 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SOD2P04179 222 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SERPIND1P05546 499 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CNTFP26441 200 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CCNFP41002 786 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 HCAR3P49019 387 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 POLE2P56282 527 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 PRKG2Q13237 762 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 RABL3Q5HYI8 236 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 DGKKQ5KSL6 1271 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 THEMIS2Q5TEJ8 643 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 MANEALQ5VSG8 457 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 SUGP1Q8IWZ8 645 aaKnown RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CALML6Q8TD86 181 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 AURKBQ96GD4 344 aaPredicted RBP9.04□□□□□ -0.96
CKAP2-201ENST00000258607 CWH43Q9H720 699 aa9.04□□□□□ -0.96
CKAP2-201ENST00000258607 MRPS23Q9Y3D9 190 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms