RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 SIRPB2Q5JXA9 342 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 VPS33AQ96AX1 596 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 VPS50Q96JG6 964 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 RPL10LQ96L21 214 aaKnown RBP16.89■□□□□ 0.29
CDK4-201ENST00000257904 KLHL5Q96PQ7 755 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 ATOH8Q96SQ7 321 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 ACBD6Q9BR61 282 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 NAA50Q9GZZ1 169 aaKnown RBP16.89■□□□□ 0.29
CDK4-201ENST00000257904 AP5M1Q9H0R1 490 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 SOX17Q9H6I2 414 aaPredicted RBP16.89■□□□□ 0.29
CDK4-201ENST00000257904 PKD2L2Q9NZM6 624 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 ZNF639Q9UID6 485 aa16.89■□□□□ 0.29
CDK4-201ENST00000257904 J3KR12 359 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 LDLRP01130 860 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 TFPTP0C1Z6 253 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 CD97P48960 835 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 KCNK10P57789 538 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 RAB15P59190 212 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 ADARB1P78563 741 aaKnown RBP16.88■□□□□ 0.29
CDK4-201ENST00000257904 CCNYL2Q5T2Q4 361 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 MARC1Q5VT66 337 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 OGFOD2Q6N063 350 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 TBATAQ96M53 351 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 SLC30A3Q99726 388 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 TUBA1CQ9BQE3 449 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 TMEM9Q9P0T7 183 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 FNIP2Q9P278 1114 aa16.88■□□□□ 0.29
CDK4-201ENST00000257904 ABT1Q9ULW3 272 aaKnown RBP16.88■□□□□ 0.29
CDK4-201ENST00000257904 A0A1B0GTL3 188 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 CPNE6O95741 557 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 ODC1P11926 461 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 HOXB8P17481 243 aaPredicted RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 TM4SF4P48230 202 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 NRG1Q02297 640 aaPredicted RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 CLCQ05315 142 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 GRSF1Q12849 480 aaKnown RBP eCLIP16.87■□□□□ 0.29
CDK4-201ENST00000257904 SFSWAPQ12872 951 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 LCP2Q13094 533 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 NEDD8Q15843 81 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 PAGE3Q5JUK9 113 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 FAM117BQ6P1L5 589 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 UMODL1-AS1Q8N2C9 162 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 PNPT1Q8TCS8 783 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 LPPQ93052 612 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 FATE1Q969F0 183 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 HMCESQ96FZ2 354 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 CNDP2Q96KP4 475 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 PKMYT1Q99640 499 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 TFB2MQ9H5Q4 396 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 AGO3Q9H9G7 860 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 POPDC3Q9HBV1 291 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 FAM105AQ9NUU6 356 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 HAS3O00219 553 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 EEDO75530 441 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 ATXN1LP0C7T5 689 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 PRR35P0CG20 571 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 YAP1P46937 504 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 ZFP36L2P47974 494 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 MRPL19P49406 292 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 MLLT6P55198 1093 aaPredicted RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 EEFSECP57772 596 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 ACVR1Q04771 509 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 ILF2Q12905 390 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 PLCL1Q15111 1095 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 UPP1Q16831 310 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 AASDHQ4L235 1098 aaPredicted RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 XKR5Q6UX68 686 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 SPATA19Q7Z5L4 167 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 OSCP1Q8WVF1 389 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 TANKQ92844 425 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 PABPC5Q96DU9 382 aaKnown RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 COX4I2Q96KJ9 171 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 TEX37Q96LM6 180 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 ZIC5Q96T25 663 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 AIG1Q9NVV5 245 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 IFT80Q9P2H3 777 aaPredicted RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 UXTQ9UBK9 157 aaPredicted RBP16.87■□□□□ 0.29
CDK4-201ENST00000257904 NUDT5Q9UKK9 219 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 ZNF711Q9Y462 761 aa16.87■□□□□ 0.29
CDK4-201ENST00000257904 TRIP12Q14669 1992 aaPredicted RBP16.86■□□□□ 0.29
CDK4-201ENST00000257904 BOLA2-SMG1P6H3BVE0 249 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 CD3EAPO15446 510 aaKnown RBP16.86■□□□□ 0.29
CDK4-201ENST00000257904 ATP6V1G1O75348 118 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 BAIAP3O94812 1187 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 GLP2RO95838 553 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 GOT2P00505 430 aaKnown RBP16.86■□□□□ 0.29
CDK4-201ENST00000257904 CYBBP04839 570 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 HAPLN1P10915 354 aaPredicted RBP16.86■□□□□ 0.29
CDK4-201ENST00000257904 ZNF12P17014 697 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 UGT1A1P22309 533 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 UGT1A4P22310 534 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 TPP2P29144 1249 aaPredicted RBP16.86■□□□□ 0.29
CDK4-201ENST00000257904 EEF1DP29692 281 aaKnown RBP16.86■□□□□ 0.29
CDK4-201ENST00000257904 UGT1A3P35503 534 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 UGT1A5P35504 534 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 SOX11P35716 441 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 SCNN1GP51170 649 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 C21orf59P57076 290 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 BNIP3Q12983 259 aa16.86■□□□□ 0.29
CDK4-201ENST00000257904 GRIK2Q13002 908 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms