RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 BRSK1Q8TDC3 778 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 ROPN1LQ96C74 230 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 C9orf16Q9BUW7 83 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 EPB41L1Q9H4G0 881 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 WARS2Q9UGM6 360 aaKnown RBP18.35■□□□□ 0.53
LRP3-201ENST00000253193 POLG2Q9UHN1 485 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 TMX2-CTNND1H3BSU7 103 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 KPNA6O60684 536 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 LDLRP01130 860 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 ATP6AP1LQ52LC2 224 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 MORN1Q5T089 497 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 ITFG2Q969R8 447 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 C17orf80Q9BSJ5 609 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 MCMBPQ9BTE3 642 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 ALG2Q9H553 416 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 UBA2Q9UBT2 640 aaPredicted RBP18.35■□□□□ 0.53
LRP3-201ENST00000253193 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.35■□□□□ 0.53
LRP3-201ENST00000253193 AFF4Q9UHB7 1163 aaKnown RBP18.35■□□□□ 0.53
LRP3-201ENST00000253193 A0A087WXM4 84 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 ALBP02768 609 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 GNAO1P09471 354 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 C16orf72Q14CZ0 275 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 KCNA10Q16322 511 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 VARS2Q5ST30 1063 aaKnown RBP18.35■□□□□ 0.53
LRP3-201ENST00000253193 SIDT2Q8NBJ9 832 aaKnown RBP18.35■□□□□ 0.53
LRP3-201ENST00000253193 RANBP9Q96S59 729 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 ADI1Q9BV57 179 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 GPR63Q9BZJ6 419 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 HACD3Q9P035 362 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 ANAPC2Q9UJX6 822 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 SLC30A1Q9Y6M5 507 aa18.35■□□□□ 0.53
LRP3-201ENST00000253193 EI24O14681 340 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 CACNG3O60359 315 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 NIPSNAP2O75323 286 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 SLC22A3O75751 556 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 CDH2P19022 906 aaPredicted RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 YAP1P46937 504 aaKnown RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 PIK3CGP48736 1102 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 AASDHQ4L235 1098 aaPredicted RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 DENND1CQ8IV53 801 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 FUNDC1Q8IVP5 155 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 LINGO1Q96FE5 620 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 CCDC138Q96M89 665 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 A8MX80 341 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 ARPC2O15144 300 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 LDB2O43679 373 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 ECI2O75521 394 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 CYBBP04839 570 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 IL2P60568 153 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 UFM1P61960 85 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 RPS24P62847 133 aaKnown RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 IL10RBQ08334 325 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 DCTN2Q13561 401 aaKnown RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 PTRHD1Q6GMV3 140 aaKnown RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 LINGO4Q6UY18 593 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 FAM126BQ8IXS8 530 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 SMPD4Q9NXE4 827 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 SEPT3Q9UH03 358 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 EIF2B4Q9UI10 523 aaKnown RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 BBIP1A8MTZ0 92 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 E2F6O75461 281 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 OR4F21O95013 312 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 MYCP01106 439 aaPredicted RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 APLP1P51693 650 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 LPIN1Q14693 890 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 GPR107Q5VW38 600 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 CHST15Q7LFX5 561 aaPredicted RBP18.34■□□□□ 0.53
LRP3-201ENST00000253193 HMGCLL1Q8TB92 370 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 FBXL20Q96IG2 436 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 NSMCE2Q96MF7 247 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 FADS3Q9Y5Q0 445 aa18.34■□□□□ 0.53
LRP3-201ENST00000253193 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.33■□□□□ 0.53
LRP3-201ENST00000253193 RHOCP08134 193 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 PRDX3P30048 256 aaKnown RBP18.33■□□□□ 0.53
LRP3-201ENST00000253193 EMP3P54852 163 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 ZNF177Q13360 481 aaPredicted RBP18.33■□□□□ 0.53
LRP3-201ENST00000253193 KIAA1841Q6NSI8 718 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 STK32CQ86UX6 486 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 SERINC5Q86VE9 423 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 OR56A4Q8NGH8 313 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 FIG4Q92562 907 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.33■□□□□ 0.53
LRP3-201ENST00000253193 UROC1Q96N76 676 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 CCDC90BQ9GZT6 254 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 POLR1BQ9H9Y6 1135 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 ZFYVE28Q9HCC9 887 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 TMEM248Q9NWD8 314 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 TMEM181Q9P2C4 612 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 PCDHB8Q9UN66 801 aa18.33■□□□□ 0.53
LRP3-201ENST00000253193 IQCF5A8MTL0 148 aa18.33■□□□□ 0.52
LRP3-201ENST00000253193 PAPSS2O95340 614 aaPredicted RBP18.33■□□□□ 0.52
LRP3-201ENST00000253193 NDST3O95803 873 aa18.33■□□□□ 0.52
LRP3-201ENST00000253193 HNRNPCP07910 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
LRP3-201ENST00000253193 MC4RP32245 332 aa18.33■□□□□ 0.52
LRP3-201ENST00000253193 CDKN1CP49918 316 aaPredicted RBP18.33■□□□□ 0.52
LRP3-201ENST00000253193 APOFQ13790 326 aa18.33■□□□□ 0.52
LRP3-201ENST00000253193 IMPG1Q17R60 797 aa18.33■□□□□ 0.52
LRP3-201ENST00000253193 PARP15Q460N3 678 aa18.33■□□□□ 0.52
LRP3-201ENST00000253193 ZNF549Q6P9A3 640 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms