RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 DEPDC7Q96QD5 511 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 OR2M4Q96R27 311 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 SRPK1Q96SB4 655 aaKnown RBP22.78■■□□□ 1.24
LSM4-201ENST00000252816 SPATA16Q9BXB7 569 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 NRSN2Q9GZP1 204 aa22.78■■□□□ 1.24
LSM4-201ENST00000252816 ACACAQ13085 2346 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 DNAJC6O75061 913 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 FGF1P05230 155 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 HLA-DPA1P20036 260 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 PSMB4P28070 264 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 CCZ1BP86790 482 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 CCZ1P86791 482 aaPredicted RBP22.77■■□□□ 1.24
LSM4-201ENST00000252816 HLTFQ14527 1009 aaKnown RBP eCLIP22.77■■□□□ 1.24
LSM4-201ENST00000252816 C14orf28Q4W4Y0 310 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 CERCAMQ5T4B2 595 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 ITPRIPL1Q6GPH6 555 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 NXPE2Q96DL1 559 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 SPATA13Q96N96 652 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 FERMT1Q9BQL6 677 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 CDH19Q9H159 772 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 BPIFA1Q9NP55 256 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 ARFGAP3Q9NP61 516 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 VPS18Q9P253 973 aa22.77■■□□□ 1.24
LSM4-201ENST00000252816 GOLGA6L9A6NEM1 432 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 AGTP01019 485 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 PTMAP06454 111 aaKnown RBP22.76■■□□□ 1.23
LSM4-201ENST00000252816 TNNT3P45378 269 aaPredicted RBP22.76■■□□□ 1.23
LSM4-201ENST00000252816 GEMP55040 296 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 RTP5Q14D33 572 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 ZNF648Q5T619 568 aaPredicted RBP22.76■■□□□ 1.23
LSM4-201ENST00000252816 C17orf82Q86X59 251 aaPredicted RBP22.76■■□□□ 1.23
LSM4-201ENST00000252816 GALNT13Q8IUC8 556 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 TRAM1L1Q8N609 369 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 TTC13Q8NBP0 860 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 ZDHHC1Q8WTX9 485 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 ZSCAN5AQ9BUG6 496 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 FICDQ9BVA6 458 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 TRABDQ9H4I3 376 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 RAD18Q9NS91 495 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 PRKAB1Q9Y478 270 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 RNF215Q9Y6U7 377 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 PKD1L2Q7Z442 2459 aa22.76■■□□□ 1.23
LSM4-201ENST00000252816 DSPP15924 2871 aaKnown RBP22.75■■□□□ 1.23
LSM4-201ENST00000252816 CFAP47Q6ZTR5 3102 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 NTN3O00634 580 aaPredicted RBP22.75■■□□□ 1.23
LSM4-201ENST00000252816 ANXA9O76027 345 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 STK10O94804 968 aaKnown RBP22.75■■□□□ 1.23
LSM4-201ENST00000252816 GLB1P16278 677 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 ADRA1AP35348 466 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 HMGCLP35914 325 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 ACTR1BP42025 376 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 MAZP56270 477 aaKnown RBP22.75■■□□□ 1.23
LSM4-201ENST00000252816 ACTR1AP61163 376 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 CCL7P80098 99 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 OLIG2Q13516 323 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 ISXQ2M1V0 245 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 ZNF569Q5MCW4 686 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 RBM44Q6ZP01 1051 aaKnown RBP22.75■■□□□ 1.23
LSM4-201ENST00000252816 OR6C4Q8NGE1 309 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 SLC35B2Q8TB61 432 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 BLOC1S5Q8TDH9 187 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 PATE1Q8WXA2 126 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 FSD1LQ9BXM9 530 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 ATXN10Q9UBB4 475 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 ZNHIT2Q9UHR6 403 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 AK5Q9Y6K8 562 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 LAMA5O15230 3695 aa22.75■■□□□ 1.23
LSM4-201ENST00000252816 SCN8AQ9UQD0 1980 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 A0A1W2PQM1 296 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 TCEA3O75764 348 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 CCDC175P0C221 793 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 PDX1P52945 283 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 RANBP10Q6VN20 620 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 ZNF662Q6ZS27 426 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 FAM71DQ8N9W8 422 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 GLYATL1Q969I3 302 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 APOL2Q9BQE5 337 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 SYNDIG1Q9H7V2 258 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 LZTFL1Q9NQ48 299 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 HACD3Q9P035 362 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 IL17CQ9P0M4 197 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 APPL1Q9UKG1 709 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 TMPRSS11EQ9UL52 423 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 RAXQ9Y2V3 346 aa22.74■■□□□ 1.23
LSM4-201ENST00000252816 C5orf60A6NFR6 353 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 BUD23O43709 281 aaKnown RBP22.73■■□□□ 1.23
LSM4-201ENST00000252816 USP12O75317 370 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 SLC25A14O95258 325 aaPredicted RBP22.73■■□□□ 1.23
LSM4-201ENST00000252816 ECEL1O95672 775 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 ZNF8P17098 575 aaPredicted RBP22.73■■□□□ 1.23
LSM4-201ENST00000252816 SPIDRQ14159 915 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 PDPK2PQ6A1A2 396 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 CCNJLQ8IV13 435 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 NAGSQ8N159 534 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 Q8N9G6 341 aaPredicted RBP22.73■■□□□ 1.23
LSM4-201ENST00000252816 WDR48Q8TAF3 677 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 PLEKHG4BQ96PX9 1271 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 OR2AG1Q9H205 316 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 LRIT1Q9P2V4 623 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 AAR2Q9Y312 384 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms