RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 GPR22Q99680 433 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 C1QTNF2Q9BXJ5 285 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 PCED1AQ9H1Q7 454 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 ASB8Q9H765 288 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.87□□□□□ -0.35
LSM8-201ENST00000249299 EBF1Q9UH73 591 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 MTF2Q9Y483 593 aaPredicted RBP12.87□□□□□ -0.35
LSM8-201ENST00000249299 PCDHB1Q9Y5F3 818 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 PSAT1Q9Y617 370 aa12.87□□□□□ -0.35
LSM8-201ENST00000249299 TCF20Q9UGU0 1960 aaKnown RBP12.86□□□□□ -0.35
LSM8-201ENST00000249299 IGLV3-16A0A075B6K0 115 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 LRRC72A6NJI9 287 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 GOLGA8TH3BQL2 631 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 QSOX1O00391 747 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 DCXO43602 365 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 LZTS3O60299 673 aaPredicted RBP12.86□□□□□ -0.35
LSM8-201ENST00000249299 RECQL5O94762 991 aaPredicted RBP12.86□□□□□ -0.35
LSM8-201ENST00000249299 APBB3O95704 486 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 SLC4A1P02730 911 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 ESR1P03372 595 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 MT-ND3P03897 115 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 KRT15P19012 456 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 GABRB3P28472 473 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 TPMTP51580 245 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 ADPRHP54922 357 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 CTBP1Q13363 440 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 GAS6Q14393 721 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 PTPRCAPQ14761 206 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 ACOX1Q15067 660 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 CHRNA6Q15825 494 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 ZRANB3Q5FWF4 1079 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 FAM151BQ6UXP7 276 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 TRIM69Q86WT6 500 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 HORMAD1Q86X24 394 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 DENND6AQ8IWF6 608 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 NXPE1Q8N323 547 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 OTUD6BQ8N6M0 293 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 DENND6BQ8NEG7 585 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 OR2T34Q8NGX1 318 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 AP2M1Q96CW1 435 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 NUS1Q96E22 293 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 TSPAN17Q96FV3 270 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 VPS39Q96JC1 886 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
LSM8-201ENST00000249299 BTBD1Q9H0C5 482 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 POPDC3Q9HBV1 291 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 CD320Q9NPF0 282 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 MKS1Q9NXB0 559 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 ANKRD36A6QL64 1941 aa12.86□□□□□ -0.35
LSM8-201ENST00000249299 COL6A3P12111 3177 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 HMX2A2RU54 273 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 SMIM23A6NLE4 172 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 A8MX80 341 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 CFAP99D6REC4 459 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 TOR1BO14657 336 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 PRMT5O14744 637 aaPredicted RBP12.85□□□□□ -0.35
LSM8-201ENST00000249299 MMP20O60882 483 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 PCDH8O95206 1070 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 GM2AP17900 193 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 ACRV1P26436 265 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 CRABP2P29373 138 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 SLC26A3P40879 764 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 ETV3P41162 512 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 SKIV2L2P42285 1042 aaKnown RBP12.85□□□□□ -0.35
LSM8-201ENST00000249299 NSG1P42857 185 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 MAGEA12P43365 314 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 SERPINB8P50452 374 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 CCR3P51677 355 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 TMED2Q15363 201 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 SETMARQ53H47 684 aaPredicted RBP12.85□□□□□ -0.35
LSM8-201ENST00000249299 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 LDLRAP1Q5SW96 308 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 KIAA1324Q6UXG2 1013 aaKnown RBP12.85□□□□□ -0.35
LSM8-201ENST00000249299 SERPINA9Q86WD7 417 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 PIANPQ8IYJ0 282 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 ARFGAP2Q8N6H7 521 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 DDHD1Q8NEL9 900 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 OR14C36Q8NHC7 312 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 BTN2A2Q8WVV5 523 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 LPGAT1Q92604 370 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 ARL8AQ96BM9 186 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 ABCG8Q9H221 673 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 CCDC68Q9H2F9 335 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 CENPHQ9H3R5 247 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 ZDHHC3Q9NYG2 299 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 IL1RAPL1Q9NZN1 696 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 MARCH4Q9P2E8 410 aaPredicted RBP12.85□□□□□ -0.35
LSM8-201ENST00000249299 KLHL42Q9P2K6 505 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 SERGEFQ9UGK8 458 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 TBK1Q9UHD2 729 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 CRLS1Q9UJA2 301 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 ITM2BQ9Y287 266 aa12.85□□□□□ -0.35
LSM8-201ENST00000249299 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
LSM8-201ENST00000249299 OR51F1A6NGY5 319 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms