RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZBED2Q9BTP6 218 aa21.8■■□□□ 1.08
RNF39-201ENST00000244360 C2orf78A6NCI8 922 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 TSPAN3O60637 253 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 NDUFS3O75489 264 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 SIX3O95343 332 aaPredicted RBP21.79■■□□□ 1.08
RNF39-201ENST00000244360 PGM3O95394 542 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 PARNO95453 639 aaKnown RBP21.79■■□□□ 1.08
RNF39-201ENST00000244360 FMO4P31512 558 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 CDH13P55290 713 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 PLD1Q13393 1074 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 AGKQ53H12 422 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 KANK2Q63ZY3 851 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 REP15Q6BDI9 236 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 HACD2Q6Y1H2 254 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 ALDH16A1Q8IZ83 802 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 STAG3L4Q8TBR4 150 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 CNBD2Q96M20 576 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 BIRC8Q96P09 236 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 SMIM14Q96QK8 99 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 ADGRE3Q9BY15 652 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 MUC3BQ9H195 1237 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 PCDHGC4Q9Y5F7 938 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 DNAJC15Q9Y5T4 150 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 MICAL3Q7RTP6 2002 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 ANKRD66B4E2M5 251 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 SRP72O76094 671 aaKnown RBP21.79■■□□□ 1.08
RNF39-201ENST00000244360 TMCC1O94876 653 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 LATS1O95835 1130 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 SOD2P04179 222 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 TFAP2AP05549 437 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 IRF1P10914 325 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 PPP3CCP48454 512 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 CCL23P55773 120 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 TRAF2Q12933 501 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 PFKFB4Q16877 469 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 IRAK1BP1Q5VVH5 260 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.79■■□□□ 1.08
RNF39-201ENST00000244360 C16orf59Q7L2K0 433 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 TTC30BQ8N4P2 665 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 DUS3LQ96G46 650 aaKnown RBP21.79■■□□□ 1.08
RNF39-201ENST00000244360 C3orf30Q96M34 536 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 SLC25A23Q9BV35 468 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 CCDC68Q9H2F9 335 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 HIPK3Q9H422 1215 aa21.79■■□□□ 1.08
RNF39-201ENST00000244360 GBF1Q92538 1859 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 SNRPB2P08579 225 aaKnown RBP21.78■■□□□ 1.08
RNF39-201ENST00000244360 MSX2P35548 267 aaPredicted RBP21.78■■□□□ 1.08
RNF39-201ENST00000244360 RAD51Q06609 339 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 SLC5A9Q2M3M2 681 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 NCEH1Q6PIU2 408 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 HERC6Q8IVU3 1022 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 SPAG4Q9NPE6 437 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 LHX3Q9UBR4 397 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 IKZF3Q9UKT9 509 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 AP4S1Q9Y587 144 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 LRRC14BA6NHZ5 514 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 H7C0S8 307 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 AZIN1O14977 448 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 TRIM24O15164 1050 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 C1RP00736 705 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 MYBPC1Q00872 1141 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 RHDQ02161 417 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 FAM219BQ5XKK7 198 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 PIANPQ8IYJ0 282 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 SLC2A11Q9BYW1 496 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 GPBP1L1Q9HC44 474 aaPredicted RBP21.78■■□□□ 1.08
RNF39-201ENST00000244360 FKBPLQ9UIM3 349 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 FAM50BQ9Y247 325 aa21.78■■□□□ 1.08
RNF39-201ENST00000244360 PPP6CO00743 305 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 CLASP2O75122 1294 aaKnown RBP21.77■■□□□ 1.08
RNF39-201ENST00000244360 RNASEH2AO75792 299 aaKnown RBP21.77■■□□□ 1.08
RNF39-201ENST00000244360 GFAPP14136 432 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 ETS2P15036 469 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 TTPAP49638 278 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 APOFQ13790 326 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 INO80DQ53TQ3 878 aaPredicted RBP21.77■■□□□ 1.08
RNF39-201ENST00000244360 C8orf82Q6P1X6 216 aaPredicted RBP21.77■■□□□ 1.08
RNF39-201ENST00000244360 NKAPQ8N5F7 415 aaKnown RBP21.77■■□□□ 1.08
RNF39-201ENST00000244360 EME1Q96AY2 570 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 NSUN5Q96P11 429 aaKnown RBP21.77■■□□□ 1.08
RNF39-201ENST00000244360 GPR21Q99679 349 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 C1QTNF3Q9BXJ4 246 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 AKTIPQ9H8T0 292 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 MID1IP1Q9NPA3 183 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 CCDC167Q9P0B6 97 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 RNF112Q9ULX5 631 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 DMTF1Q9Y222 760 aa21.77■■□□□ 1.08
RNF39-201ENST00000244360 GFRA2O00451 464 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 KLK8O60259 260 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 SNAP91O60641 907 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 PYGLP06737 847 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 ALDOCP09972 364 aaKnown RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 CDKN1CP49918 316 aaPredicted RBP21.76■■□□□ 1.07
RNF39-201ENST00000244360 ARHGEF6Q15052 776 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 PTPRNQ16849 979 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.76■■□□□ 1.07
RNF39-201ENST00000244360 PSAPL1Q6NUJ1 521 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 BORAQ6PGQ7 559 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 B3GNT6Q6ZMB0 384 aa21.76■■□□□ 1.07
RNF39-201ENST00000244360 TMEM150AQ86TG1 271 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms