RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 ANHXE9PGG2 379 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 SLC9A3R1O14745 358 aaPredicted RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 EPHB6O15197 1021 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 GSC2O15499 205 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 DAPK3O43293 454 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 HCRTO43612 131 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 NDUFS6O75380 124 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 BMP10O95393 424 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 CRTAMO95727 393 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 BAG2O95816 211 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 CKMP06732 381 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 EPHX1P07099 455 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 RETP07949 1114 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 HNRNPA1P09651 372 aaKnown RBP eCLIP3.65□□□□□ -1.82
UFM1-201ENST00000239878 THRAP10827 490 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 ODC1P11926 461 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 HMGA1P17096 107 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 C5AR1P21730 350 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 NME2P22392 152 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 FCARP24071 287 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 ALDH7A1P49419 539 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 COPB1P53618 953 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 GNG2P59768 71 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 IL2P60568 153 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 CDR2Q01850 454 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 DLX2Q07687 328 aaPredicted RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 KCNJ12Q14500 433 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 KYNUQ16719 465 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 TAF1BQ53T94 588 aaPredicted RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 FAM209BQ5JX69 171 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 KIAA1841Q6NSI8 718 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 NPNTQ6UXI9 565 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 ZNF704Q6ZNC4 412 aaPredicted RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 IDO2Q6ZQW0 420 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 BEND5Q7L4P6 421 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 TMPRSS9Q7Z410 1059 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 NET1Q7Z628 596 aaPredicted RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 PRUNE1Q86TP1 453 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 LRRTM4Q86VH4 590 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 CCDC25Q86WR0 208 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 KIAA2013Q8IYS2 634 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 FBXL6Q8N531 539 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 SLC4A11Q8NBS3 891 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 OR10Z1Q8NGY1 313 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 HPDLQ96IR7 371 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 B3GALT6Q96L58 329 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 HEXIM2Q96MH2 286 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 TSNARE1Q96NA8 513 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 RANBP9Q96S59 729 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 TSG101Q99816 390 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 ELOVL4Q9GZR5 314 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 INTS2Q9H0H0 1204 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 IL21Q9HBE4 155 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 PNPLA8Q9NP80 782 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 RAB20Q9NX57 234 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 TAB2Q9NYJ8 693 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 IL20Q9NYY1 176 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 COQ3Q9NZJ6 369 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 H2AFY2Q9P0M6 372 aaPredicted RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 ARMCX3Q9UH62 379 aaPredicted RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 RSL24D1Q9UHA3 163 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 AFF4Q9UHB7 1163 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 ENOPH1Q9UHY7 261 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 NOCTQ9UK39 431 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 CDH9Q9ULB4 789 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 SOX13Q9UN79 622 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.65□□□□□ -1.82
UFM1-201ENST00000239878 ATP8B3O60423 1300 aa3.65□□□□□ -1.82
UFM1-201ENST00000239878 COL6A3P12111 3177 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 A0A1W2PQJ5 194 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 TCRBV5S1A1TA0A578 114 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 PGPEP1LA6NFU8 196 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 SHISA7A6NL88 538 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 NT5C1B-RDH14C9J2C7 533 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 TAF4O00268 1085 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 TXNDC9O14530 226 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 KPNA5O15131 536 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 SLC7A4O43246 635 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 NDUFA2O43678 99 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 UGT1A9O60656 530 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 SCO1O75880 301 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 UBXN7O94888 489 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 PIGNO95427 931 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 ADH1BP00325 375 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 PLEKP08567 350 aaPredicted RBP3.65□□□□□ -1.83
UFM1-201ENST00000239878 CD48P09326 243 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 INHBBP09529 407 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 HAPLN1P10915 354 aaPredicted RBP3.65□□□□□ -1.83
UFM1-201ENST00000239878 ATF2P15336 505 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 UGT1A6P19224 532 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 UGT1A1P22309 533 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 UGT1A4P22310 534 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 HNRNPH3P31942 346 aaKnown RBP3.65□□□□□ -1.83
UFM1-201ENST00000239878 UGT1A3P35503 534 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 UGT1A5P35504 534 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 MTIF2P46199 727 aaKnown RBP3.65□□□□□ -1.83
UFM1-201ENST00000239878 OR1G1P47890 313 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 HCAR3P49019 387 aa3.65□□□□□ -1.83
UFM1-201ENST00000239878 YWHAGP61981 247 aaKnown RBP eCLIP3.65□□□□□ -1.83
UFM1-201ENST00000239878 PLIN5Q00G26 463 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms