RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 HAS1Q92839 578 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 AURKBQ96GD4 344 aaPredicted RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 OMDQ99983 421 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TRIT1Q9H3H1 467 aaKnown RBP8.19□□□□□ -1.1
APOB-201ENST00000233242 BTRCQ9Y297 605 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 LACTBL1A8MY62 500 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 TNFRSF11BO00300 401 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 FOXN2P32314 431 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 MATKP42679 507 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 HECTD3Q5T447 861 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 SIPA1Q96FS4 1042 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 FAM84AQ96KN4 292 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 PPM1MQ96MI6 270 aa8.19□□□□□ -1.1
APOB-201ENST00000233242 ADRB2P07550 413 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 OR1G1P47890 313 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 ZNHIT3Q15649 155 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 PTPRNQ16849 979 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 KLHL22Q53GT1 634 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 DSG4Q86SJ6 1040 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 MEMO1Q9Y316 297 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 GRIP1Q9Y3R0 1128 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 POLR3HQ9Y535 204 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 NFASCO94856 1347 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CNTNAP2Q9UHC6 1331 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 AP3D1O14617 1153 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 GPD2P43304 727 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 RPL7AP62424 266 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 DAG1Q14118 895 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 TCEA2Q15560 299 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 ZDHHC20Q5W0Z9 365 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 TAPT1Q6NXT6 567 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 TTC29Q8NA56 475 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 HEXDCQ8WVB3 486 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 HDAC10Q969S8 669 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 AGAP2Q99490 1192 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 PCDHGB3Q9Y5G1 929 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 KCNU1A8MYU2 1149 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CCNYL3P0C7X3 344 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 EPORP19235 508 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 SMIM5Q71RC9 77 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 UFD1Q92890 307 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 PPCDCQ96CD2 204 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 TRBC1P01850 177 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 SERPINA4P29622 427 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 RBM34P42696 430 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 RDH12Q96NR8 316 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 MCCC1Q96RQ3 725 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 CAPN10Q9HC96 672 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 PITPNM1O00562 1244 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 FAM189A1O60320 539 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 UROSP10746 265 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CDH1P12830 882 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 LPOP22079 712 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 ZNF517Q6ZMY9 492 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 COPS4Q9BT78 406 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 EML1O00423 815 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 FFAR3O14843 346 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 GPR42O15529 346 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 NOL4O94818 638 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 LRG1P02750 347 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CTSHP09668 335 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CPB2Q96IY4 423 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 SLC4A9Q96Q91 983 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 MGME1Q9BQP7 344 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 IRF2BPLQ9H1B7 796 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 NUDT4Q9NZJ9 180 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 MTRRQ9UBK8 725 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 KCNE2Q9Y6J6 123 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 ARPC4-TTLL3A0A0A6YYG9 625 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 RIIAD1A6NNX1 92 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 H7C2Y5 167 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 ZNF45Q02386 682 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 ZNF773Q6PK81 442 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 CLP1Q92989 425 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 TRNT1Q96Q11 434 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 C2orf49Q9BVC5 232 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 MMP27Q9H306 513 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 KLK14Q9P0G3 267 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 TNFSF13BQ9Y275 285 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 CYP7B1O75881 506 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 BCAS2O75934 225 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 PORP16435 677 aaPredicted RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 MAZP56270 477 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 TGFB2P61812 414 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 EDEM1Q92611 657 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 LRTM1Q9HBL6 345 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 RPL36Q9Y3U8 105 aaKnown RBP8.18□□□□□ -1.1
APOB-201ENST00000233242 PDCD5O14737 125 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 MAGEB3O15480 346 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 ALDH4A1P30038 563 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 MKL1Q969V6 931 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 MYH7BA7E2Y1 1941 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 ATRNO75882 1429 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 SH3PXD2BA1X283 911 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 LYPLA2O95372 231 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 EPHB3P54753 998 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 BCL2L1Q07817 233 aa8.18□□□□□ -1.1
APOB-201ENST00000233242 SNAPC1Q16533 368 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms