RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 B4GALT4O60513 344 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 REP15Q6BDI9 236 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 C17orf64Q86WR6 236 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 SLC34A3Q8N130 599 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 CPSF7Q8N684 471 aaKnown RBP17.79■□□□□ 0.44
EXTL3-201ENST00000220562 CD84Q9UIB8 345 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 GPC6Q9Y625 555 aaPredicted RBP17.79■□□□□ 0.44
EXTL3-201ENST00000220562 FAM25EA8MYX2 175 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 GLUD1P00367 558 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 FGBP02675 491 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 PPM1JQ5JR12 505 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 SLC26A9Q7LBE3 791 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 FCRL4Q96PJ5 515 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 PDP1Q9P0J1 537 aaPredicted RBP17.79■□□□□ 0.44
EXTL3-201ENST00000220562 PPP1R11O60927 126 aaPredicted RBP17.79■□□□□ 0.44
EXTL3-201ENST00000220562 TOP3BO95985 862 aaKnown RBP17.79■□□□□ 0.44
EXTL3-201ENST00000220562 KLF10Q13118 480 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 TBC1D21Q8IYX1 336 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 LENG1Q96BZ8 264 aaPredicted RBP17.79■□□□□ 0.44
EXTL3-201ENST00000220562 CHRAC1Q9NRG0 131 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 TMA7Q9Y2S6 64 aaKnown RBP17.79■□□□□ 0.44
EXTL3-201ENST00000220562 PCDHB1Q9Y5F3 818 aa17.79■□□□□ 0.44
EXTL3-201ENST00000220562 ATG13O75143 517 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CAPGP40121 348 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 ZNF132P52740 706 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 RNASE12Q5GAN4 147 aaKnown RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 HPS6Q86YV9 775 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 APOLD1Q96LR9 279 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 INTS7Q9NVH2 962 aaKnown RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 EVLQ9UI08 416 aaPredicted RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 IFNGP01579 166 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 MPP1Q00013 466 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 MBTD1Q05BQ5 628 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 FAM131AQ6UXB0 335 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 LDB1Q86U70 411 aaPredicted RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 ATRNO75882 1429 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 C2P06681 752 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 ADRA1BP35368 520 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 PSMD8P48556 350 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 SLC5A3P53794 718 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CACNG1Q06432 222 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 TUSC3Q13454 348 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 C9orf64Q5T6V5 341 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 GLYATQ6IB77 296 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 ZYG11AQ6WRX3 759 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 LRRC17Q8N6Y2 441 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 C12orf50Q8NA57 414 aaPredicted RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CLPTM1LQ96KA5 538 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CIDEBQ9UHD4 219 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 TIMM22Q9Y584 194 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 AK5Q9Y6K8 562 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 RNF225M0QZC1 329 aaPredicted RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 SLC5A9Q2M3M2 681 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 OAFQ86UD1 273 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CDADC1Q9BWV3 514 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 DNAJC11Q9NVH1 559 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 OSER1Q9NX31 292 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 MFHAS1Q9Y4C4 1052 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 SMIM28A0A1B0GU29 152 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 C9P02748 559 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 MMP8P22894 467 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 PPM1AP35813 382 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 PBX1P40424 430 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CTSKP43235 329 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 TATDN1Q6P1N9 297 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 PHYKPLQ8IUZ5 450 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 FAM47BQ8NA70 645 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 FAR1Q8WVX9 515 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 MCCC1Q96RQ3 725 aaPredicted RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 AIF1LQ9BQI0 150 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CDH22Q9UJ99 828 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 CNOT6Q9ULM6 557 aaKnown RBP17.78■□□□□ 0.44
EXTL3-201ENST00000220562 PSMD13Q9UNM6 376 aa17.78■□□□□ 0.44
EXTL3-201ENST00000220562 TCRBV7S2A1N4TA0A589 114 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 GSC2O15499 205 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 FGF19O95750 216 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 ITPKBP27987 946 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 XIAPP98170 497 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 SLC1A5Q15758 541 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 PQLC1Q8N2U9 271 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 AP2M1Q96CW1 435 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 COX4I2Q96KJ9 171 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 RAB23Q9ULC3 237 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 ING4Q9UNL4 249 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 ZFP37Q9Y6Q3 630 aaPredicted RBP17.77■□□□□ 0.44
EXTL3-201ENST00000220562 KCNU1A8MYU2 1149 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 FFAR2O15552 330 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 CST3P01034 146 aaPredicted RBP17.77■□□□□ 0.44
EXTL3-201ENST00000220562 PKMP14618 531 aaKnown RBP17.77■□□□□ 0.44
EXTL3-201ENST00000220562 NDUFV1P49821 464 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 SF1Q15637 639 aaKnown RBP17.77■□□□□ 0.44
EXTL3-201ENST00000220562 CLEC6AQ6EIG7 209 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 RFWD3Q6PCD5 774 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 FOXR2Q6PJQ5 311 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 JAZF1Q86VZ6 243 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 PTCD2Q8WV60 388 aaKnown RBP17.77■□□□□ 0.44
EXTL3-201ENST00000220562 TRMOQ9BU70 441 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 BRINP2Q9C0B6 783 aa17.77■□□□□ 0.44
EXTL3-201ENST00000220562 TMEM131LA2VDJ0 1609 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms