RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 SUV39H2Q9H5I1 410 aa17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 EML4Q9HC35 981 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 GTSE1Q9NYZ3 720 aa17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 DPP7Q9UHL4 492 aa17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 IKZF3Q9UKT9 509 aa17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 COMMD10Q9Y6G5 202 aa17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
RABGGTA-201ENST00000216840 UBXN8O00124 270 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 NEMP1O14524 444 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 PRAMEF1O95521 474 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 ESR1P03372 595 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 MTHFD2P13995 350 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 EPHA3P29320 983 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 CA5AP35218 305 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 ATP6V0D1P61421 351 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 GALNT1Q10472 559 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 LSM12Q3MHD2 195 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 UNC50Q53HI1 259 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 TMEM215Q68D42 235 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 DPY19L3Q6ZPD9 716 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 NKAPQ8N5F7 415 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 SIDT2Q8NBJ9 832 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 GIMAP7Q8NHV1 300 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 IL26Q9NPH9 171 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 NPIPB15A6NHN6 443 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 TRIM24O15164 1050 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 KERAO60938 352 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 POP4O95707 220 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 BPIP17213 487 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 HERVK_113P63132 956 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 PDCD2Q16342 344 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 CERS6Q6ZMG9 384 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 TSPAN33Q86UF1 283 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 CUZD1Q86UP6 607 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 SERPINA9Q86WD7 417 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 TMPRSS6Q8IU80 811 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 PHTF2Q8N3S3 785 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 NAT16Q8N8M0 369 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 PTGR2Q8N8N7 351 aaPredicted RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 RBM15BQ8NDT2 890 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 CD200R1Q8TD46 325 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 KCNJ9Q92806 393 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 LRRC3BQ96PB8 259 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 ERVK-6Q9BXR3 956 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 ZDHHC6Q9H6R6 413 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 TNFRSF12AQ9NP84 129 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 TRMT6Q9UJA5 497 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 CDYLQ9Y232 598 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 PPIL1Q9Y3C6 166 aa17.12■□□□□ 0.33
RABGGTA-201ENST00000216840 A8MX80 341 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 TSPAN12O95859 305 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 ERVK-21P61565 698 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CRTC1Q6UUV9 634 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 Q6ZVU0 165 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 ACAD11Q709F0 780 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SNX20Q7Z614 316 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CBARPQ8N350 705 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 C12orf76Q8N812 135 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CHST14Q8NCH0 376 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 STAG3L4Q8TBR4 150 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 MYLIPQ8WY64 445 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SMG7Q92540 1137 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CCDC97Q96F63 343 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SCRN2Q96FV2 425 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SAMD11Q96NU1 681 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 TRMOQ9BU70 441 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CCDC28BQ9BUN5 200 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SLC2A11Q9BYW1 496 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 ASB8Q9H765 288 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 PIDD1Q9HB75 910 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 APPL1Q9UKG1 709 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 TRBV5-4A0A0C4DH59 114 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 UBFD1O14562 309 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 PRMT5O14744 637 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 DCXO43602 365 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SUPT7LO94864 414 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CHRM3P20309 590 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 SEMG2Q02383 582 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 NFATC2Q13469 925 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CELF5Q8N6W0 485 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 POU5F2Q8N7G0 328 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 FAR2Q96K12 515 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 ZNF641Q96N77 438 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 ERVW-1Q9UQF0 538 aa17.11■□□□□ 0.33
RABGGTA-201ENST00000216840 CHD9Q3L8U1 2897 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 C2orf16Q68DN1 1984 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 CDC7O00311 574 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 WFS1O76024 890 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 UGT2B4P06133 528 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 ITGALP20701 1170 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 RPS3P23396 243 aaKnown RBP eCLIP17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 CLCN7P51798 805 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 NAA25Q14CX7 972 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 TSNQ15631 228 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 PFKFB4Q16877 469 aa17.1■□□□□ 0.33
RABGGTA-201ENST00000216840 GRAMD4Q6IC98 578 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms