RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 XKR8Q9H6D3 395 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 TNPO3Q9Y5L0 923 aaKnown RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 SNCAIPQ9Y6H5 919 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 NFASCO94856 1347 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 A6NHS1 94 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SLITRK3O94933 977 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 CYP2A6P11509 494 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 HOXB6P17509 224 aaKnown RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 YWHAQP27348 245 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 PBLDP30039 288 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 PSEN2P49810 448 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 CDH13P55290 713 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 NRG1Q02297 640 aaPredicted RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 ACSM2AQ08AH3 577 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 PITRM1Q5JRX3 1037 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ACSM2BQ68CK6 577 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SLC30A10Q6XR72 485 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 AMIGO1Q86WK6 493 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 GPC2Q8N158 579 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 TNFAIP8L1Q8WVP5 186 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 MED8Q96G25 268 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 OR52E6Q96RD3 313 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 HEPHQ9BQS7 1158 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 YTHDF1Q9BYJ9 559 aaKnown RBP10.41□□□□□ -0.74
VCL-201ENST00000211998 RACGAP1Q9H0H5 632 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 NR2E1Q9Y466 385 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 ARHGAP23Q9P227 1491 aa10.41□□□□□ -0.74
VCL-201ENST00000211998 SIGLEC16A6NMB1 481 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 FFAR3O14843 346 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 GPR42O15529 346 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 XYLBO75191 536 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 TRUB2O95900 331 aaKnown RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 GUCA1AP43080 201 aaPredicted RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 ADIGQ0VDE8 80 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 MYLK3Q32MK0 819 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 R3HCC1LQ7Z5L2 792 aaKnown RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 DSG4Q86SJ6 1040 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 MAP4K3Q8IVH8 894 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 SELENOMQ8WWX9 145 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 NELL1Q92832 810 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 HDAC10Q969S8 669 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 ITPKCQ96DU7 683 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 RNF157Q96PX1 679 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 FAM129BQ96TA1 746 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 PKP2Q99959 881 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 GTPBP2Q9BX10 602 aaKnown RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 VWDEQ8N2E2 1590 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 CRYZL1O95825 349 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 IGSF6O95976 241 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 S100A2P29034 98 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 FMO3P31513 532 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 RORCP51449 518 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 PSMD5Q16401 504 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 CTC1Q2NKJ3 1217 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 PLEKHG6Q3KR16 790 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 MTSS1LQ765P7 747 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 ATP13A1Q9HD20 1204 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 TMEM9Q9P0T7 183 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 OAS3Q9Y6K5 1087 aaKnown RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 PLOD2O00469 737 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 SLC30A4O14863 429 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 ZNF432O94892 652 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 PRAMEF1O95521 474 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 RPN2P04844 631 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 CLCN5P51795 746 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 IL2P60568 153 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 TBRG1Q3YBR2 411 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 PPM1JQ5JR12 505 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 GPRIN3Q6ZVF9 776 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 SVOPLQ8N434 492 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 REPS1Q96D71 796 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 HSD3B7Q9H2F3 369 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 HPF1Q9NWY4 346 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 TISP43B9A030 160 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 FOXD2O60548 495 aaPredicted RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 TULP3O75386 442 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 HPGDP15428 266 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 THOP1P52888 689 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 SOX10P56693 466 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 SLC6A3Q01959 620 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 ARL13AQ5H913 290 aaPredicted RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 DUS1LQ6P1R4 473 aaKnown RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 ZDHHC24Q6UX98 284 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 ZZZ3Q8IYH5 903 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 TTC29Q8NA56 475 aaPredicted RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 FCGR1BQ92637 280 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 MKL1Q969V6 931 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 PHOX2BQ99453 314 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 NFKBIZQ9BYH8 718 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 SAV1Q9H4B6 383 aaPredicted RBP10.4□□□□□ -0.74
VCL-201ENST00000211998 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
VCL-201ENST00000211998 C2P06681 752 aa10.4□□□□□ -0.75
VCL-201ENST00000211998 XRCC1P18887 633 aaPredicted RBP10.4□□□□□ -0.75
VCL-201ENST00000211998 ADORA2AP29274 412 aa10.4□□□□□ -0.75
VCL-201ENST00000211998 CEBPGP53567 150 aa10.4□□□□□ -0.75
VCL-201ENST00000211998 WDR45BQ5MNZ6 344 aa10.4□□□□□ -0.75
VCL-201ENST00000211998 TMEM159Q96B96 161 aa10.4□□□□□ -0.75
VCL-201ENST00000211998 HAVCR1Q96D42 359 aa10.4□□□□□ -0.75
VCL-201ENST00000211998 ITCHQ96J02 903 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms