RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CDK14O94921 469 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 PGLSO95336 258 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CHEK2O96017 543 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CYBBP04839 570 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 MTHFD2P13995 350 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 RAG1P15918 1043 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 ME2P23368 584 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 THOP1P52888 689 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 ADARP55265 1226 aaKnown RBP8.21□□□□□ -1.09
VAMP3-201ENST00000054666 RPL26P61254 145 aaKnown RBP8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CLCQ05315 142 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 PPP1R3AQ16821 1122 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 MPPE1Q53F39 396 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 AGKQ53H12 422 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 PIGGQ5H8A4 983 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 REP15Q6BDI9 236 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 IRGCQ6NXR0 463 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 ZFP1Q6P2D0 407 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CERS6Q6ZMG9 384 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CCDC149Q6ZUS6 474 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 FRA10AC1Q70Z53 315 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 LYSMD3Q7Z3D4 306 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 FAM217AQ8IXS0 508 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 PIANPQ8IYJ0 282 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CPXM2Q8N436 756 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 SIDT2Q8NBJ9 832 aaKnown RBP8.21□□□□□ -1.09
VAMP3-201ENST00000054666 WFDC5Q8TCV5 224 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 TRPC4APQ8TEL6 797 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 DLG3Q92796 817 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 BIRC8Q96P09 236 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 SMIM14Q96QK8 99 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 NPAS2Q99743 824 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 ZBED2Q9BTP6 218 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 MAGEE1Q9HCI5 957 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 SARS2Q9NP81 518 aaKnown RBP8.21□□□□□ -1.09
VAMP3-201ENST00000054666 PFDN4Q9NQP4 134 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CCDC167Q9P0B6 97 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 CFAP97Q9P2B7 532 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 EPS15L1Q9UBC2 864 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 OR51B4Q9Y5P0 310 aa8.21□□□□□ -1.09
VAMP3-201ENST00000054666 ATP6AP2A0A1C7CYW4 349 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 NCF1BA6NI72 391 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 NCF1CA8MVU1 366 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 PRMT5O14744 637 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 FZD6O60353 706 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 OR1I1O60431 355 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 SOCS5O75159 536 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 VPS4BO75351 444 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 ATP6AP2O75787 350 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 STAMBPO95630 424 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 MLYCDO95822 493 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 MT-CO1P00395 513 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 SNRPB2P08579 225 aaKnown RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 FGF4P08620 206 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 RPS17P08708 135 aaKnown RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 SPATA31D3P0C874 917 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 NCF1P14598 390 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 ZNF7P17097 686 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 CTPS1P17812 591 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 ITGALP20701 1170 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 HMGCLP35914 325 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 CDKN1CP49918 316 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 PKNOX1P55347 436 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 SH3BP2P78314 561 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 SLC7A9P82251 487 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 BLMHQ13867 455 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 CTSL3PQ5NE16 218 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 KANK2Q63ZY3 851 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 SPATA31D4Q6ZUB0 917 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 OR6K2Q8NGY2 324 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 CD200R1Q8TD46 325 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 MICAL1Q8TDZ2 1067 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 ADAMTS19Q8TE59 1207 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 DIS3LQ8TF46 1054 aaKnown RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 FUBP1Q96AE4 644 aaKnown RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 CLPBQ9H078 707 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 CRISPLD2Q9H0B8 497 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 ZBP1Q9H171 429 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 ATP13A3Q9H7F0 1226 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 ADA2Q9NZK5 511 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 CD274Q9NZQ7 290 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 IL17CQ9P0M4 197 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 KIAA1522Q9P206 1035 aaPredicted RBP8.21□□□□□ -1.1
VAMP3-201ENST00000054666 MED16Q9Y2X0 877 aa8.21□□□□□ -1.1
VAMP3-201ENST00000054666 BPTFQ12830 3046 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 C1orf232A0A0U1RR37 186 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 BBIP1A8MTZ0 92 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 CDC7O00311 574 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 GFRA2O00451 464 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 TRIM38O00635 465 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 MRASO14807 208 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 PIP5K1BO14986 540 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 TGM5O43548 720 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 FGF18O76093 207 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 BAIAP3O94812 1187 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 S100BP04271 92 aaPredicted RBP8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ADH1AP07327 375 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 C8AP07357 584 aa8.2□□□□□ -1.1
VAMP3-201ENST00000054666 ALPIP09923 528 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms