RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 BTBD10Q9BSF8 475 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 TBCDQ9BTW9 1192 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 OSBPL6Q9BZF3 934 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 MMADHCQ9H3L0 296 aaPredicted RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC40A1Q9NP59 571 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 IGKV6D-21A0A0A0MT36 114 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 RBM47A0AV96 593 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 LDLRP01130 860 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 C8GP07360 202 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 RHOP08100 348 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 NR2F1P10589 423 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 KLC1Q07866 573 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 BST1Q10588 318 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 ESRP1Q6NXG1 681 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SNX20Q7Z614 316 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 AMZ2Q86W34 360 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 MICU2Q8IYU8 434 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 POMGNT2Q8NAT1 580 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 CYB5D2Q8WUJ1 264 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 CEP44Q9C0F1 390 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 NKX2-4Q9H2Z4 354 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SRMSQ9H3Y6 488 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 CRTAC1Q9NQ79 661 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SAR1AQ9NR31 198 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 INTS10Q9NVR2 710 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 ATP6V1HQ9UI12 483 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 H3BNH8 94 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 PRMT3O60678 531 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 IDO1P14902 403 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SCTRP47872 440 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 PNLIPRP1P54315 467 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 STX4Q12846 297 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 USP39Q53GS9 565 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 AP1ARQ63HQ0 302 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 FAAH2Q6GMR7 532 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 MSANTD2Q6P1R3 559 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 GATAD2AQ86YP4 633 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 POU5F2Q8N7G0 328 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 KLK6Q92876 244 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 HERC2P3Q9BVR0 1158 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 POLR1BQ9H9Y6 1135 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SEMA3GQ9NS98 782 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 POLR3BQ9NW08 1133 aaPredicted RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 USE1Q9NZ43 259 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 BACE2Q9Y5Z0 518 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 NWD2Q9ULI1 1742 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 HNRNPLP14866 589 aaKnown RBP eCLIP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 VAV1P15498 845 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 PPIBP23284 216 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 AVL9Q8NBF6 648 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 GTPBP1O00178 669 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 GABRDO14764 452 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 APOA1P02647 267 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 KRT8P05787 483 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 SLC35G6P0C7Q6 338 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 GRM2Q14416 872 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 NCF4Q15080 339 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 PDK4Q16654 411 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 TRIM40Q6P9F5 258 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 OLFML1Q6UWY5 402 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 C10orf107Q8IVU9 208 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 ZNF786Q8N393 782 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 UTP15Q8TED0 518 aaKnown RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 MFSD3Q96ES6 412 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 RNF145Q96MT1 663 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 CDRT15Q96T59 188 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 OR2AG1Q9H205 316 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 EBF3Q9H4W6 596 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 DCLRE1BQ9H816 532 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 VRTNQ9H8Y1 702 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 RPS6KA6Q9UK32 745 aa10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 MTF2Q9Y483 593 aaPredicted RBP10.3□□□□□ -0.76
NIPAL3-201ENST00000003912 PKD1L3Q7Z443 1732 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 IGKV6-21A0A0C4DH24 114 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CLDN4O14493 209 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 PIK3R1P27986 724 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 NUP107P57740 925 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 IRGCQ6NXR0 463 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 CYB5D1Q6P9G0 228 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 SCIMPQ6UWF3 145 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 HFE2Q6ZVN8 426 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ITCHQ96J02 903 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 LMLNQ96KR4 655 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 FBXL12Q9NXK8 326 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 IL1RAPL1Q9NZN1 696 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 GNEQ9Y223 722 aaKnown RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 TCRBV7S2A1N4TA0A589 114 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 LINC00032P0C843 101 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ACADSP16219 412 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ALAS2P22557 587 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 NDUFS1P28331 727 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 LIMK2P53671 638 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 MYLK3Q32MK0 819 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 MS4A13Q5J8X5 152 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 WDR45BQ5MNZ6 344 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 KIAA0930Q6ICG6 404 aaPredicted RBP10.29□□□□□ -0.76
NIPAL3-201ENST00000003912 ENPP7Q6UWV6 458 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms