RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Sox9Q04887 507 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zfp560Q3URI6 754 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 ScinQ60604 715 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Olfr299Q7TS05 330 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zfp65Q91W94 390 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zdhhc7Q91WU6 308 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mlf2Q99KX1 247 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Pdzd3Q99MJ6 498 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ppil6Q9D6D8 278 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Grm3Q9QYS2 879 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ddx39bQ9Z1N5 428 aaKnown RBP22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm9573F7C950 1606 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Tmem235B1AQL3 211 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Smok3aC0HKC8 504 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Smok3bC0HKC9 504 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Dcpp2E9PYC2 171 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm20671F6TVX7 576 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Dcpp1L7N1X9 171 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Socs5O54928 536 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 StyxQ60969 223 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ablim3Q69ZX8 682 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ssx9Q6XAS3 170 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Rabep2Q91WG2 554 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mapk8Q91Y86 384 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Fam90a1bQ9D4F3 419 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Oma1Q9D8H7 521 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 CasrQ9QY96 1079 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gria4Q9Z2W8 902 aa22.8■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ighv11-1A0A075B5R6 117 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Armt1A6H630 439 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mgat4eA6H684 439 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm21738J3QP72 227 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Aldh3a1P47739 453 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Atp5bP56480 529 aaKnown RBP22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Kpnb1P70168 876 aaKnown RBP22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 OtulinQ3UCV8 352 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Slfn4Q3UV66 602 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Eri2Q5BKS4 688 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ppp1r13lQ5I1X5 824 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Prpf38bQ80SY5 542 aaKnown RBP22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Chil6Q80W26 440 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Grk2Q99MK8 689 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Akr1c12Q9JLI0 323 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 PikfyveQ9Z1T6 2097 aa22.79■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm7792A0A0J9YU01 481 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm3183D3YUJ6 481 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm3139J3QK78 481 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm6408J3QNG1 320 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm3106J3QPH3 481 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Gm3402K7N5P2 326 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 NumblO08919 604 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Il6raP22272 460 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Hnf1bP27889 558 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Tnfrsf4P47741 272 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Sstr4P49660 385 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 TigitP86176 249 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 KizQ3UXL4 695 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Marveld2Q3UZP0 555 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Paqr6Q6TCG5 343 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Olfr855Q7TRF8 312 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Dhx33Q80VY9 698 aaKnown RBP22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zfp438Q8BFX2 798 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Syt12Q920N7 421 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Pycr2Q922Q4 320 aaKnown RBP22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zfp1P08042 402 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Atp2c1Q80XR2 918 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Dtd2Q8BHA3 168 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Mgat5Q8R4G6 740 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Slc5a9Q8VDT1 685 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 AmotQ8VHG2 1126 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Smad9Q9JIW5 430 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Dbn1Q9QXS6 706 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ptpn4Q9WU22 926 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Speer3W4VSP1 261 aa22.78■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Igkv12-98A0A0G2JGF9 115 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zfp811A0A0J9YU71 552 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Igkv12-46A0A140T8P6 115 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Klhl32A2AJX0 620 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 CatsperbA2RTF1 1109 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Vmn2r103E9PWW0 856 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Cyp2j12G3UXT0 502 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ltb4rO88855 351 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Npr1P18293 1057 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Sstr3P30935 428 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Stx2Q00262 289 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Zfyve27Q3TXX3 415 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 CenplQ3U3S3 329 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Il10raQ61727 575 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Ino80dQ66JY2 873 aaKnown RBP22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Olfr1325Q8VF43 315 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Fzd5Q9EQD0 585 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 RhojQ9ER71 214 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 PapolbQ9WVP6 641 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 Il18rapQ9Z2B1 614 aa22.77■■□□□ 1.24
Upf3a-201ENSMUST00000043767 SelenovD3YXG1 328 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Krt90E9Q1Z0 538 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 P01679 107 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 Man1a1P45700 655 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 ChatQ03059 641 aa22.77■■□□□ 1.23
Upf3a-201ENSMUST00000043767 HadhQ61425 314 aa22.77■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms