RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Fam189a2Q4FZH1 290 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Syce1lQ5D525 247 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hsd3b5Q61694 373 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gga2Q6P5E6 603 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tha1Q6XPS7 400 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pphln1Q8K2H1 381 aaKnown RBP11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ahi1Q8K3E5 1047 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Zfp623Q9CY99 499 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 NbnQ9R207 751 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc23a1Q9Z2J0 605 aa11.83□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm5751A2AHC8 147 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 SmgcF6VRN1 385 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 GcatO88986 416 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 H2-Q7P14429 334 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 H2-Q9P14431 200 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gdpd5Q640M6 607 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Txndc15Q6P6J9 344 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ints7Q7TQK1 966 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fbxw8Q8BIA4 598 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Slc9a7Q8BLV3 726 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Metap1Q8BP48 386 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 BollQ924M5 281 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm14401A2ARV7 303 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Galnt4O08832 578 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 CatP24270 527 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Adh5P28474 374 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 WasP70315 520 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Trim67Q505D9 768 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tmem151bQ68FE7 561 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Scaf4Q6PFF0 1209 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tspan14Q8QZY6 270 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tcf7l2Q924A0 459 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dus2Q9D7B1 493 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rab13Q9DD03 202 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Abt1Q9QYL7 269 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ccdc88aQ5SNZ0 1873 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm4907B1AXB9 411 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ildr2B5TVM2 661 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfr564E9PWA8 316 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tekt5G5E8A8 557 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Unc5cO08747 931 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Bub1O08901 1058 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 F9P16294 471 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Defa8P50706 81 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ncf4P97369 339 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Atp5jP97450 108 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gata5P97489 404 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sh3bp2Q06649 559 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ppm1hQ3UYC0 513 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Itga3Q62470 1053 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Wfikkn2Q7TQN3 571 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pcdh8Q7TSK3 1070 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hist1h2aaQ8CGP4 129 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 BicralQ8CHH5 1074 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ca12Q8CI85 354 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Col26a1Q91VF6 440 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dnajc9Q91WN1 259 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Rbm47Q91WT8 590 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MpstQ99J99 297 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Hsd3b7Q9EQC1 369 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ptar1E9QAB6 424 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Flt3Q00342 1000 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lpcat1Q3TFD2 534 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Armcx5Q3UZB0 606 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sgo2Q7TSY8 1164 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 B3gnt7Q8K0J2 397 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Usp45Q8K387 813 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Nudt4Q8R2U6 179 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mtif2Q91YJ5 727 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tma16Q9CR02 221 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Dusp26Q9D700 211 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Adam24Q9R160 761 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 NesQ6P5H2 1864 aaKnown RBP11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Auts2A0A087WPF7 1261 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Sdccag3A2AIW0 432 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ankrd34aB2RW11 495 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Gm6811E9Q3Y8 510 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Limk2O54785 638 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Mcpt1P11034 246 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ets2P15037 468 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 MutP16332 748 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 OstnP61364 130 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Tatdn1Q6P8M1 295 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Efr3bQ6ZQ18 817 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ofcc1Q8BGX4 166 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fbxl4Q8BH70 621 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Elp6Q8BK75 266 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Agbl3Q8CDP0 1006 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Pcdhb16Q91Y03 802 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Cops7aQ9CZ04 275 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Glod5Q9D8I3 148 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Ndufa13Q9ERS2 144 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Lat2Q9JHL0 203 aa11.82□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Zfp963D3Z2T8 383 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Olfm1O88998 485 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 TshrP47750 764 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Fbxo9Q8BK06 437 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Akr1c13Q8VC28 323 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 4933425L06RikQ9D3Z8 585 aa11.81□□□□□ -0.52
Pcif1-201ENSMUST00000041643 Kifc5bE9PUA5 672 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms