RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Scamp3O35609 349 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Hipk1O88904 1210 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Slc2a2P14246 523 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 HecaQ3V1N5 544 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Fcrl5Q68SN8 596 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Adam29Q811Q4 763 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Arhgap28Q8BN58 729 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Tprg1Q8CB49 279 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Clec4a3Q8JZX6 237 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Bloc1s5Q8R015 185 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Olfr690Q8VH18 315 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Hnrnpa0Q9CX86 305 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 UqcrbQ9D855 111 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Il18rapQ9Z2B1 614 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Tyw5A2RSX7 315 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Sf1Q64213 653 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Dusp11Q6NXK5 321 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Aldh3b1Q80VQ0 468 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Gm6377Q8BHV4 303 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Mterf2Q8BKY8 385 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Zfp617Q91WM0 559 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Rbm47Q91WT8 590 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Atp5f1Q9CQQ7 256 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Fam217bA2AJW5 387 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Ccnb1ip1D3Z3K2 276 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 2610021A01RikE9Q0Q3 834 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 JhyE9Q793 770 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Ifnar2O35664 513 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Chst3O88199 472 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 E2f2P56931 443 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Creb1Q01147 341 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Tmem199Q5SYH2 208 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Zdhhc20Q5Y5T1 380 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Svs1Q6WIZ7 820 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Ahcyl1Q80SW1 530 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Trmt10aQ8C1Z8 328 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Guf1Q8C3X4 651 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Slc25a3Q8VEM8 357 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Cpxm2Q9D2L5 764 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Dusp26Q9D700 211 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Mcemp1Q9D8U6 183 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 RhouQ9EQT3 261 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 EmcnQ9R0H2 261 aa16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Keap1Q9Z2X8 624 aaKnown RBP16.54■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Gm7945F6QI24 236 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 FgrP14234 517 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Gna12P27600 379 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Khdc4Q3TCX3 612 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Scube1Q6NZL8 1018 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Klhl6Q6V595 619 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Svs2Q8BS30 375 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Bclaf1Q8K019 919 aaKnown RBP16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Dnm1lQ8K1M6 742 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Akr1a1Q9JII6 325 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Slc5a3Q9JKZ2 718 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 TesminQ9WTJ6 475 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Itgb6Q9Z0T9 787 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Ptpn3A2ALK8 913 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Fkbp8O35465 402 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 EgfP01132 1217 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Got2P05202 430 aaKnown RBP16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Mkl2P59759 1080 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Fbln1Q08879 705 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Meaf6Q2VPQ9 191 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Ssr2Q9CPW5 183 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Prorsd1Q9D820 169 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Sec14l1A8Y5H7 715 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Mkrn2osD3Z393 217 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Sema3aO08665 772 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Polr2jO08740 117 aaKnown RBP16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Lire1P11260 357 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Lmo2P25801 158 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Ctc1Q5SUQ9 1212 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Rasa4Q6PFQ7 802 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Tmem164Q6PHN7 296 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 SvopQ8BFT9 548 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 FicdQ8BIX9 458 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Mfsd6Q8CBH5 775 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Adgrg1Q8K209 687 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Mkl1Q8K4J6 964 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 ItpkaQ8R071 459 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 MpstQ99J99 297 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Cops7aQ9CZ04 275 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Tnfrsf21Q9EPU5 655 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 SpastQ9QYY8 614 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Cib1Q9Z0F4 191 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Gm13088A2AGW6 460 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Fam124aD3Z5V4 536 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Clec2lP0C7M9 211 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Asgr1P34927 284 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Rab26Q504M8 260 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 MogQ61885 246 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Tspan18Q80WR1 248 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Gpr21Q8BX79 349 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Slc35a5Q921R7 437 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Dok4Q99KE3 325 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 4930513O06RikQ9D549 161 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Ssr3Q9DCF9 185 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 EefsecQ9JHW4 583 aa16.53■□□□□ 0.24
Ubfd1-201ENSMUST00000033158 Orc6Q9WUJ8 262 aa16.53■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms