RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Spag6Q9JLI7 507 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpc1Q9QZF2 557 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fam151bD3YUE4 279 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gm2832F7AEC7 200 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Ccl26F8VQM2 93 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Znf683I7HJS4 458 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 MrasO08989 208 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Fpr-rs3O88537 343 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tas2r16P59529 299 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Osbp2Q5QNQ6 908 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Defa17Q64016 82 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 SvopQ8BFT9 548 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pcdh20Q8BIZ0 952 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Q8BP99 230 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Cpne3Q8BT60 533 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Gpat3Q8C0N2 438 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Asb2Q8K0L0 634 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Acsf2Q8VCW8 615 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Barhl2Q8VIB5 384 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Pfdn1Q9CWM4 122 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Prorsd1Q9D820 169 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Bpifa3Q9D9J8 232 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mmp19Q9JHI0 527 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Tuba8Q9JJZ2 449 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Krt6bQ9Z331 562 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Spta1P08032 2415 aa10.84□□□□□ -0.67
Msh3-201ENSMUST00000022220 Mup6A2AV72 179 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Znf518bB2RRE4 1077 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 FanceB8JJD6 213 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm8237E9Q257 205 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc4a5E9Q3M5 1116 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Enpp1P06802 906 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Il6raP22272 460 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 CratP47934 626 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Matn1P51942 500 aaKnown RBP10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 WasP70315 520 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 BmxP97504 651 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 PrlrQ08501 608 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tspan18Q80WR1 248 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tyw1Q8BJM7 721 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mapkap1Q8BKH7 522 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 DseQ8BLI4 958 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Camk1dQ8BW96 385 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 ScaiQ8C8N2 606 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Samd7Q8C8Y5 445 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ccdc63Q8CDV6 558 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rnf219Q8K2Y0 722 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Smyd2Q8R5A0 433 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zfp617Q91WM0 559 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 KmoQ91WN4 479 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gtf2ird2Q99NI3 936 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fcf1Q9CTH6 198 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Psmd8Q9CX56 353 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Q9D979 236 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tmem174Q9DCX7 243 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Trhr2Q9ERT2 382 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Trpc4apQ9JLV2 797 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vmn1r49Q9WUF1 310 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm3259D3YUK0 475 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 PiggD3Z3Y1 983 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Kcnt2D3Z649 1135 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm13128L7MU96 475 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm6614M0QWR8 670 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 LdhcP00342 332 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 LdlrP35951 862 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rbp1Q00915 135 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Grin2cQ01098 1239 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Aqp1Q02013 269 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dusp2Q05922 318 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cpne7Q0VE82 557 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 BtrcQ3ULA2 605 aaKnown RBP10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm5800Q497L3 186 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zscan26Q5RJ54 466 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Kcnh1Q60603 989 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ca4Q64444 305 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam149b1Q6NSV7 578 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 RbfaQ6P3B9 350 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dlgap3Q6PFD5 977 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc6a15Q8BG16 729 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rmdn2Q8BSE0 410 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 OsgepQ8BWU5 335 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Stk32cQ8QZV4 488 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mtfr1Q99MB2 328 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pik3cgQ9JHG7 1102 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Adam17Q9Z0F8 827 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Robo3Q9Z2I4 1366 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm3147A0A0J9YU88 481 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mrgpra2aA0A0R4J1Z0 331 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr566A0A1B0GST0 319 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 IsxA1A546 240 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 4930558K02RikE0CXC6 182 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cd151O35566 253 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Eci1P42125 289 aaKnown RBP10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Lsm3P62311 102 aaKnown RBP10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Smpd1Q04519 627 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Shcbp1lQ3TTP0 639 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hexim2Q3TVI4 313 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm1587Q3UT80 123 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam126aQ6P9N1 521 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 AtminQ6P9S1 818 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms