RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Clk4O35493 481 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Sptlc1O35704 473 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Chrna1P04756 457 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 CtswP56203 371 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Mmp20P57748 482 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Prkd1Q62101 918 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 PtprrQ62132 656 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 InavaQ7TN12 663 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ankrd45Q810N6 248 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 QpctlQ8BH73 383 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Olfr393Q8VGR6 312 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gstt3Q99L20 241 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gins4Q99LZ3 223 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Zmat2Q9CPW7 199 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 1700129C05RikQ9CQ77 218 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Clec2gQ9D676 269 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Efcab9Q9DAM2 216 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 AnkhQ9JHZ2 492 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Il17rbQ9JIP3 499 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Zfp236S4R299 1847 aa17.69■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gbp11A9YVJ5 442 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Cntnap3E9PY62 1287 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Hk2O08528 917 aaKnown RBP17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 PdgfrbP05622 1098 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Zfp39Q02525 718 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Stmnd1Q6P3A1 279 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ddx55Q6ZPL9 600 aaKnown RBP17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gpr171Q8BG55 319 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Itih5Q8BJD1 952 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Tmem209Q8BRG8 561 aaKnown RBP17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Olfr183Q8VFB9 309 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Q9D979 236 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ppp1r2Q9DCL8 206 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Spin2gA0A0N4SW15 236 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Zfp563B8JJZ9 448 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Spin2eJ3QNQ0 234 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Bnc1O35914 961 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Pole2O54956 527 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ccdc153P0C7Q1 202 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gabarapl2P60521 117 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Lsm3P62311 102 aaKnown RBP17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ext2P70428 718 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Pnpla5Q32LZ8 432 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Tgtp2Q3T9E4 415 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Q3UJP5 209 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Fam198bQ3UPI1 517 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gm11437Q5QR91 290 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Tgtp1Q62293 415 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 RimklaQ6PFX8 380 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 DglucyQ8BH86 617 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Kcnv1Q8BZN2 503 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Pwp1Q99LL5 501 aaKnown RBP17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Fbxo8Q9QZN3 319 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Galk1Q9R0N0 392 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Psma4Q9R1P0 261 aa17.68■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 PotegA5H0M4 473 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Cpa3P15089 417 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gm732Q3V0P9 516 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 BadQ61337 204 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 4933409G03RikQ8C5U0 320 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 L2hgdhQ91YP0 464 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Twf1Q91YR1 350 aaKnown RBP17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Dhrs1Q99L04 313 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Raver1Q9CW46 748 aaKnown RBP17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ints11Q9CWS4 600 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Tnfrsf10bQ9QZM4 381 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 SrcapA0A087WQ44 3271 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gm29106A0A087WSP8 697 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gm43796A0A0J9YV32 372 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Rad21l1A2AU37 552 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gm5930D3Z257 264 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Gimd1E9PW74 217 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Olfr1121L7MTT1 314 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 P01673 111 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Npy2rP97295 381 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 BtrcQ3ULA2 605 aaKnown RBP17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ms4a15Q3UPL6 245 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Tbc1d24Q3UUG6 561 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 NkaplQ5SZT7 395 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Caprin1Q60865 707 aaKnown RBP17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Pim2Q62070 370 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Znf512Q69Z99 562 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ip6k1Q6PD10 433 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Q80Y73 168 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Q8BP99 230 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ifi44Q8BV66 422 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Olfr575Q8VH16 318 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Ilf2Q9CXY6 390 aaKnown RBP17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 GabarapQ9DCD6 117 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Hs6st3Q9QYK4 470 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Bmp15Q9Z0L4 392 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Cacna1cQ01815 2139 aa17.67■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Olfr1049A2ARZ0 308 aa17.66■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 CrnnD3YUU6 520 aa17.66■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Vmn2r54K7N649 806 aa17.66■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 AlyrefO08583 255 aaKnown RBP17.66■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Azin1O35484 448 aa17.66■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 AurkaP97477 395 aa17.66■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Foxred2Q3USW5 665 aa17.66■□□□□ 0.42
Sqstm1-201ENSMUST00000015981 Rnf43Q5NCP0 784 aa17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms