RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ntrk2P15209 821 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Ctnna1P26231 906 aaKnown RBP16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Pcbp4P57724 403 aaKnown RBP16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Emilin3P59900 758 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Pdcd1Q02242 288 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Tmem217Q14AF1 189 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 9130409I23RikQ3TS87 320 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 LchnQ3UHG7 455 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Hdgfl2Q3UMU9 669 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 HnrnpdQ60668 355 aaKnown RBP16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Ggt1Q60928 568 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Dpysl3Q62188 570 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Anks6Q6GQX6 883 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Fstl5Q8BFR2 847 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Q8BHN7 327 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Suds3Q8BR65 328 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Pnpla8Q8K1N1 776 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Syngr3Q8R191 229 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 PhykplQ8R1K4 467 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Tcaf2Q921K8 919 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Zswim7Q9CWQ2 152 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Cldn22Q9D7U6 220 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Bace2Q9JL18 514 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 SigirrQ9JLZ8 409 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 ApipQ9WVQ5 241 aa16.84■□□□□ 0.29
Trim54-201ENSMUST00000013771 Fbn2Q61555 2907 aa16.83■□□□□ 0.29
Trim54-201ENSMUST00000013771 Lipo2D3YY49 398 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Scgb2b7D3YYY1 112 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Scamp3O35609 349 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ctps1P70698 591 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Bex6Q3TZW7 114 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Znf185Q62394 352 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cdc14bQ6PFY9 485 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Hs3st3a1Q8BKN6 393 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Mettl21cQ8BLU2 248 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Klhl7Q8BUL5 586 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 B4gat1Q8BWP8 415 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Yipf4Q8C407 246 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ano4Q8C5H1 955 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ephb1Q8CBF3 984 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Mtss1Q8R1S4 759 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Mtfr2Q8VED8 361 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Olfr1411Q8VFC4 323 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Tspan1Q99J59 240 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 ClpsQ9CQC2 113 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Tdrd12Q9CWU0 1215 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ppil1Q9D0W5 166 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Mau2Q9D2X5 619 aaKnown RBP16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Tchhl1Q9D3P1 638 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Bbs10Q9DBI2 713 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Spag4Q9JJF2 443 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 SqorQ9R112 450 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Vmn1r49Q9WUF1 310 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Zzef1Q5SSH7 2924 aa16.83■□□□□ 0.28
Trim54-201ENSMUST00000013771 Golga4Q91VW5 2238 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Gm43796A0A0J9YV32 372 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 MipepA6H611 711 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cfap221A9Q751 836 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cldn34b1B1AZQ8 209 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Vmn2r118E9Q1C1 853 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 PtgdsO09114 189 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ctbp1O88712 441 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 LgmnO89017 435 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Serpina3kP07759 418 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Klra1P20937 262 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 CryabP23927 175 aaKnown RBP16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Clpsl2Q3UW21 102 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Defb48Q3UW22 87 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Trim38Q5SZ99 471 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 OgdhQ60597 1023 aaKnown RBP16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Sema3bQ62177 748 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 KdsrQ6GV12 332 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ccdc117Q6PB51 277 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ssxb10Q6XAR7 170 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 SpopQ6ZWS8 374 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Vrk1Q80X41 440 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Impg2Q80XH2 1243 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Znf574Q8BY46 900 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Fsd1lQ8BYN5 507 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ttc34Q8C0Q3 554 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Ube2q2Q8K2Z8 378 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Olfr371Q8VGB8 312 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Zfp65Q91W94 390 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Nudt21Q9CQF3 227 aaKnown RBP16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cyp2u1Q9CX98 530 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cuedc2Q9CXX9 284 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Tmem135Q9CYV5 458 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Pcbd2Q9CZL5 136 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Cldn34b2Q9D9N2 209 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Slc13a1Q9JHI4 594 aa16.82■□□□□ 0.28
Trim54-201ENSMUST00000013771 Trmt1lA2RSY6 728 aaKnown RBP16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Gm14862B1AV28 81 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Lce6aD3YV94 81 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Gm3298E9PW80 205 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Tsga10ipF7A1F0 157 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Vmn2r51L7N215 852 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Sema3aO08665 772 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Pex5O09012 639 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Kcnk4O88454 398 aa16.81■□□□□ 0.28
Trim54-201ENSMUST00000013771 Adh1P00329 375 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms