RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SARDHQ9UL12 918 aa9.41□□□□□ -0.9
PHGDH-228ENST00000641847 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
PHGDH-228ENST00000641847 BTBD3Q9Y2F9 522 aa9.41□□□□□ -0.9
PHGDH-228ENST00000641847 HEMK1Q9Y5R4 338 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-228ENST00000641847 UBR5O95071 2799 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 A0A1W2PQ67 120 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 E7ESA3 106 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 RNASEH1O60930 286 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 RFPL3O75679 317 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ADH1BP00325 375 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 EPOP01588 193 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ALPIP09923 528 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 FAM153BP0C7A2 387 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PIRTP0C851 137 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 TPH1P17752 444 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 CTPS1P17812 591 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ITGB7P26010 798 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 METAP1P53582 386 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 RPL26P61254 145 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PDIA2Q13087 525 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 SEPT6Q14141 434 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 POU6F1Q14863 301 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 FASTKD3Q14CZ7 662 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 BRD3Q15059 726 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 KIF19Q2TAC6 998 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 FAM153CQ494X1 144 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 MAP9Q49MG5 647 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 CERCAMQ5T4B2 595 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 FAM46CQ5VWP2 391 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ZNF776Q68DI1 518 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 EMBQ6PCB8 327 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 BRAT1Q6PJG6 821 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 CEP128Q6ZU80 1094 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PARS2Q7L3T8 475 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PRICKLE2Q7Z3G6 844 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 SPACA3Q8IXA5 215 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 AGGF1Q8N302 714 aaeCLIP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 MPP5Q8N3R9 675 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ZNF248Q8NDW4 579 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PPHLN1Q8NEY8 458 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 OR2T3Q8NH03 318 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 BLOC1S5Q8TDH9 187 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PIH1D2Q8WWB5 315 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ARRDC3Q96B67 414 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 SKA1Q96BD8 255 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 SIPA1Q96FS4 1042 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PPP1R16AQ96I34 528 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 SMIM14Q96QK8 99 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 WDR83Q9BRX9 315 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PHACTR1Q9C0D0 580 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 TSPYL1Q9H0U9 437 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 SLC6A17Q9H1V8 727 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ARNT2Q9HBZ2 717 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 DYRK4Q9NR20 520 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 BFARQ9NZS9 450 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 USP36Q9P275 1121 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 PHTF1Q9UMS5 762 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 RPL26L1Q9UNX3 145 aaKnown RBP9.4□□□□□ -0.9
PHGDH-228ENST00000641847 CHMP2BQ9UQN3 213 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 ANKRD6Q9Y2G4 727 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 SNX11Q9Y5W9 270 aa9.4□□□□□ -0.9
PHGDH-228ENST00000641847 MYO9AB2RTY4 2548 aa9.4□□□□□ -0.91
PHGDH-228ENST00000641847 CABIN1Q9Y6J0 2220 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 A0A0J9YYE9 177 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 C16orf96A6NNT2 1141 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 ANKRD66B4E2M5 251 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 MID1O15344 667 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 BRINP1O60477 761 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 ERLIN1O75477 346 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 LDOC1O95751 146 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-228ENST00000641847 TRBC1P01850 177 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 SLC4A1P02730 911 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 PRKCGP05129 697 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 XPAP23025 273 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-228ENST00000641847 SLC8A1P32418 973 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 ABL2P42684 1182 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 NPY2RP49146 381 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 TPMTP51580 245 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 C21orf59P57076 290 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 RPS14P62263 151 aaKnown RBP9.39□□□□□ -0.91
PHGDH-228ENST00000641847 CRADDP78560 199 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 SRSF1Q07955 248 aaKnown RBP eCLIP9.39□□□□□ -0.912e-10■■■□□ 18.2
PHGDH-228ENST00000641847 SLMAPQ14BN4 828 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 CST6Q15828 149 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 LRRC73Q5JTD7 316 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-228ENST00000641847 DENND2CQ68D51 928 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 CASC4Q6P4E1 433 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 USP45Q70EL2 814 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 GLT6D1Q7Z4J2 308 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 TMC3Q7Z5M5 1100 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 ANKMY2Q8IV38 441 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 ZBED8Q8IZ13 594 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 NDUFAF2Q8N183 169 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 STAMBPL1Q96FJ0 436 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 MED8Q96G25 268 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 CFAP36Q96G28 342 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 FAM117AQ9C073 453 aa9.39□□□□□ -0.91
PHGDH-228ENST00000641847 IL22Q9GZX6 179 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms