RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ATP5OP48047 213 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CD97P48960 835 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 EIF3EP60228 445 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 ETF1P62495 437 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 ZFP36L1Q07352 338 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 SLC20A2Q08357 652 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 NIPAL4Q0D2K0 466 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 ZNF235Q14590 738 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 RFTN1Q14699 578 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 KCTD19Q17RG1 926 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CARD16Q5EG05 197 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 PAPD7Q5XG87 772 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 KCTD16Q68DU8 428 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 TIGD7Q6NT04 549 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 PARGQ86W56 976 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 LRRC49Q8IUZ0 686 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CDKL3Q8IVW4 592 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 RASGEF1CQ8N431 466 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 RYBPQ8N488 228 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 ARL14Q8N4G2 192 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 TEX26Q8N6G2 289 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 OR2AP1Q8NGE2 309 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 TFB1MQ8WVM0 346 aaKnown RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 C1orf54Q8WWF1 131 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 FATE1Q969F0 183 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 PMEPA1Q969W9 287 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 PSKH2Q96QS6 385 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 IL12RB2Q99665 862 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC3Q9BQI4 270 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 MGME1Q9BQP7 344 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 C1QTNF2Q9BXJ5 285 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 HDAC8Q9BY41 377 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 NT5MQ9NPB1 228 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 DNAJC28Q9NX36 388 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 HECAQ9UBI9 543 aaPredicted RBP7.42□□□□□ -1.22
PHGDH-225ENST00000641720 SEPT3Q9UH03 358 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 DNPEPQ9ULA0 475 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 TTLL3Q9Y4R7 772 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CCDC88CQ9P219 2028 aa7.42□□□□□ -1.22
PHGDH-225ENST00000641720 CROCCQ5TZA2 2017 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PRAMEF33A0A0G2JMD5 474 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 BLACEA4D250 179 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 NEMP2A6NFY4 417 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 HACD1B0YJ81 288 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 LMO7DNF2Z398 122 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PGRMC1O00264 195 aaKnown RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PDE2AO00408 941 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 LIASO43766 372 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PRAMEF10O60809 474 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PPFIA2O75334 1257 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 LEFTY1O75610 366 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 JCHAINP01591 159 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 UGT2B4P06133 528 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 MMP2P08253 660 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 RBP3P10745 1247 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ITIH1P19827 911 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 CD68P34810 354 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 IGFALSP35858 605 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 CASRP41180 1078 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ABL2P42684 1182 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 GDF10P55107 478 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 SNRPD1P62314 119 aaKnown RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 DSC2Q02487 901 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 EIF3IQ13347 325 aaKnown RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 XRCC4Q13426 336 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 SNX1Q13596 522 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 NR0B2Q15466 257 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 OASLQ15646 514 aaKnown RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 LONRF2Q1L5Z9 754 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 MYLK3Q32MK0 819 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ARSIQ5FYB1 569 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 LRRC73Q5JTD7 316 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 MARC1Q5VT66 337 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 FAM46CQ5VWP2 391 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ALG1LQ6GMV1 187 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 SYT10Q6XYQ8 523 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 USP53Q70EK8 1073 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PARS2Q7L3T8 475 aaKnown RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 RAB11FIP2Q7L804 512 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PTAR1Q7Z6K3 402 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 SRLQ86TD4 932 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ZFAND4Q86XD8 727 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ZSWIM9Q86XI8 627 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ZGRF1Q86YA3 2104 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 DCP2Q8IU60 420 aaKnown RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 SLITRK4Q8IW52 837 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PLPP6Q8IY26 295 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PRELID2Q8N945 189 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 TMIEQ8NEW7 156 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ARRDC2Q8TBH0 407 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 FAM174AQ8TBP5 190 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 MIB2Q96AX9 1013 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 PBKQ96KB5 322 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 CAPZA3Q96KX2 299 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 LENG8Q96PV6 779 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-225ENST00000641720 NUDCD1Q96RS6 583 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 GORASP1Q9BQQ3 440 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 BRD8Q9H0E9 1235 aa7.41□□□□□ -1.22
PHGDH-225ENST00000641720 ADNPQ9H2P0 1102 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms