RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 ERVK-11Q9UQG0 969 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 AAR2Q9Y312 384 aaKnown RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 FAM172BPA6NC97 362 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 ZSCAN9O15535 394 aaPredicted RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 MBTPS2O43462 519 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 TBL1XO60907 577 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 APOL3O95236 402 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 ZNF806P0C7X5 589 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 HOXC13P31276 330 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 BCAP31P51572 246 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 VBP1P61758 197 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 NRG1Q02297 640 aaPredicted RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 COX10Q12887 443 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 RAP1GAP2Q684P5 730 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 LAYNQ6UX15 382 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 KDM1BQ8NB78 822 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 FAM13CQ8NE31 585 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 PSMA8Q8TAA3 256 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 P2RY13Q9BPV8 354 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 LPIN3Q9BQK8 851 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 NAT9Q9BTE0 207 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 EXOSC4Q9NPD3 245 aaKnown RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 HMGXB4Q9UGU5 601 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 DMGDHQ9UI17 866 aaKnown RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 HEY1Q9Y5J3 304 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 SH3D21A4FU49 640 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 CST8O60676 142 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 SRFP11831 508 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 SERPINA4P29622 427 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 GP5P40197 560 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 NRLP54845 237 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 RHAGQ02094 409 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 SCAPQ12770 1279 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 OVGP1Q12889 678 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 CSTF3Q12996 717 aaKnown RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 ARHGEF7Q14155 803 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 HMBOX1Q6NT76 420 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 ZC3H14Q6PJT7 736 aaKnown RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 ABRAXAS1Q6UWZ7 409 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 KBTBD6Q86V97 674 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 AHI1Q8N157 1196 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 NARS2Q96I59 477 aaKnown RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 VPS11Q9H270 941 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 HSD3B7Q9H2F3 369 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 ELOVL6Q9H5J4 265 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 SPHK2Q9NRA0 654 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 TMLHEQ9NVH6 421 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 DNMT3BQ9UBC3 853 aaKnown RBP5.67□□□□□ -1.5
RTTN-218ENST00000640408 HCSTQ9UBK5 93 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 VANGL2Q9ULK5 521 aa5.67□□□□□ -1.5
RTTN-218ENST00000640408 LINC00854A0A1B0GVQ3 168 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 RNF103O00237 685 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 COCHO43405 550 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ZDHHC11BP0C7U3 371 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 F8A1P23610 371 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 NUP62P37198 522 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 FDFT1P37268 417 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 MRPS21P82921 87 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 LGALS3BPQ08380 585 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SMAD2Q15796 467 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 PKDCCQ504Y2 493 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FNDC3BQ53EP0 1204 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 NAPEPLDQ6IQ20 393 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 RIPOR1Q6ZS17 1223 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 BBS12Q6ZW61 710 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PID1Q7Z2X4 250 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 RAB43Q86YS6 212 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 PIK3C3Q8NEB9 887 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ZMIZ2Q8NF64 920 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 GPR152Q8TDT2 470 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CD101Q93033 1021 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 TMEM209Q96SK2 561 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ADGRE3Q9BY15 652 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 CCDC177Q9NQR7 707 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 DNAJC11Q9NVH1 559 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FKBP14Q9NWM8 211 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SLC24A2Q9UI40 661 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SCML1Q9UN30 329 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 ERVW-1Q9UQF0 538 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 NAALADL1Q9UQQ1 740 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 TPRKBQ9Y3C4 175 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 NEU2Q9Y3R4 380 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 AP4B1Q9Y6B7 739 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 MICAL3Q7RTP6 2002 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FAM170AA1A519 330 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FBP2O00757 339 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 RIPK2O43353 540 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 MYCLP1P12525 358 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 PAMP19021 973 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 NUDT1P36639 197 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SLC26A3P40879 764 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 EIF3EP60228 445 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 AP1S1P61966 158 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 FOXD4Q12950 439 aaPredicted RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 AUHQ13825 339 aaKnown RBP5.66□□□□□ -1.5
RTTN-218ENST00000640408 ERAP2Q6P179 960 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 DEFB107AQ8IZN7 70 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 SLC25A41Q8N5S1 370 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 LRRC17Q8N6Y2 441 aa5.66□□□□□ -1.5
RTTN-218ENST00000640408 DCAF4L2Q8NA75 395 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms