RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 MFSD1Q9H3U5 465 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PIF1Q9H611 641 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 MIOSQ9NXC5 875 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ANAPC2Q9UJX6 822 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 CASTOR2A6NHX0 329 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 J3QRK9 145 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 SLC7A4O43246 635 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 SNAP91O60641 907 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 KPNA6O60684 536 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 C7P10643 843 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 FCGR1AP12314 374 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 MATN1P21941 496 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TIAL1Q01085 375 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TGFBIQ15582 683 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PAN2Q504Q3 1202 aaKnown RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ANKRD26P1Q6NSI1 321 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 NANOGP8Q6NSW7 305 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF354CQ86Y25 554 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 RTL3Q8N8U3 475 aaKnown RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 CASP10Q92851 521 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 FBXL8Q96CD0 374 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 COX4I2Q96KJ9 171 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TBATAQ96M53 351 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 RTP3Q9BQQ7 232 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 NOL6Q9H6R4 1146 aaKnown RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ATP13A1Q9HD20 1204 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TMLHEQ9NVH6 421 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PKD2L2Q9NZM6 624 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 SLAMF8Q9P0V8 285 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 IFT80Q9P2H3 777 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TIMM22Q9Y584 194 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 KANSL1LA0AUZ9 987 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 E9PAM4 449 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 J3KR12 359 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 CBFA2T3O75081 653 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 PEX11BO96011 259 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 F2P00734 622 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 FDXRP22570 491 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ELK4P28324 431 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 CASP2P42575 452 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 MAGEA8P43361 318 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 SLC10A7Q0GE19 358 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 SFSWAPQ12872 951 aaKnown RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TRAF2Q12933 501 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ZIK1Q3SY52 487 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 OTUD3Q5T2D3 398 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 AFMIDQ63HM1 303 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 USP51Q70EK9 711 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 RAB44Q7Z6P3 723 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TFAP2DQ7Z6R9 452 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ZC3H7AQ8IWR0 971 aaKnown RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 LPPQ93052 612 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 ACDQ96AP0 544 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 IMP4Q96G21 291 aaKnown RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 MTG1Q9BT17 334 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 TRIM54Q9BYV2 358 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 SEMA4BQ9NPR2 832 aaPredicted RBP10.88□□□□□ -0.67
SNIP1-204ENST00000638725 GPR45Q9Y5Y3 372 aa10.88□□□□□ -0.67
SNIP1-204ENST00000638725 CLASP2O75122 1294 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 DDNO94850 711 aaPredicted RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 LDLRP01130 860 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 MMP2P08253 660 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 GJA5P36382 358 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 SLC26A3P40879 764 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 HLCSP50747 726 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 BMXP51813 675 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 ADARB1P78563 741 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 FOXM1Q08050 763 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 NFATC3Q12968 1075 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 ATP1A4Q13733 1029 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 FSCN1Q16658 493 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 TIGD5Q53EQ6 642 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 BRMS1LQ5PSV4 323 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 FAM117BQ6P1L5 589 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 DCDC5Q6ZRR9 648 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 GALNT7Q86SF2 657 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 DPP9Q86TI2 863 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 DDHD1Q8NEL9 900 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 CDCA5Q96FF9 252 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 TMEM209Q96SK2 561 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 ZFYVE28Q9HCC9 887 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 INTS10Q9NVR2 710 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 HS3ST4Q9Y661 456 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 A0A1W2PP18 115 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 MROH6A6NGR9 719 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 TRIM64BA6NI03 449 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 K7EPI3 171 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 NOL3O60936 208 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 PAPSS2O95340 614 aaPredicted RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 OCM2P0CE71 109 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 OCMP0CE72 109 aaPredicted RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 SLC2A3P11169 496 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 IDO1P14902 403 aa10.87□□□□□ -0.67
SNIP1-204ENST00000638725 PORP16435 677 aaPredicted RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 ZNF37AP17032 561 aaPredicted RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 EEF1B2P24534 225 aaKnown RBP10.87□□□□□ -0.67
SNIP1-204ENST00000638725 PCSK1P29120 753 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms