RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 RALGAPA2Q2PPJ7 1873 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 ARPC2O15144 300 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 NIPSNAP2O75323 286 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 TMCC1O94876 653 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 ATXN1LP0C7T5 689 aaKnown RBP13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 ZNF37AP17032 561 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 NR4A1P22736 598 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC6A2P23975 617 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 RGRP47804 291 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 HK2P52789 917 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 SPRYD7Q5W111 196 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 DNAJC14Q6Y2X3 702 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 CARM1Q86X55 608 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 FBXO39Q8N4B4 442 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 GTF3C2Q8WUA4 911 aaPredicted RBP13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 PPM1MQ96MI6 270 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 SERPINB11Q96P15 392 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 KATNAL1Q9BW62 490 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 SPO11Q9Y5K1 396 aa13.98□□□□□ -0.17
CACNA1A-228ENST00000636610 NUP214P35658 2090 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 H3BNH8 94 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 FXYD1O00168 92 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 TNPO2O14787 897 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 ZFC3H1O60293 1989 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 DNAJB2P25686 324 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 CTBSQ01459 385 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 CLCQ05315 142 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 NHSL2Q5HYW2 709 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 GPR107Q5VW38 600 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 TMEM214Q6NUQ4 689 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 KIAA0408Q6ZU52 694 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 RAB44Q7Z6P3 723 aaPredicted RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 SIDT2Q8NBJ9 832 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 NSMCE3Q96MG7 304 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 RNF145Q96MT1 663 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 ZNF23P17027 643 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 EEF1B2P24534 225 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 PSMA4P25789 261 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 RPL9P32969 192 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 HPCAP84074 193 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 TAF10Q12962 218 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 TUSC3Q13454 348 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 PTPRNQ16849 979 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 PABPC1LQ4VXU2 614 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 PYCR3Q53H96 274 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 OR4L1Q8NH43 312 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 ZC3H15Q8WU90 426 aaKnown RBP13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 LRRC58Q96CX6 371 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 TCF12Q99081 682 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 CCDC68Q9H2F9 335 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 CATSPERZQ9NTU4 200 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 MARCH2Q9P0N8 246 aa13.97□□□□□ -0.17
CACNA1A-228ENST00000636610 A8MX80 341 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ECI2O75521 394 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 SNAP29O95721 258 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 IL10P22301 178 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ENTPD1P49961 510 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 RPS24P62847 133 aaKnown RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 EIF4EBP2Q13542 120 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 C16orf72Q14CZ0 275 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 MORN1Q5T089 497 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 LINGO4Q6UY18 593 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 PAF1Q8N7H5 531 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 OR10Q1Q8NGQ4 319 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 DDI1Q8WTU0 396 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 PTCD2Q8WV60 388 aaKnown RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 PKMYT1Q99640 499 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ADI1Q9BV57 179 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ARHGAP39Q9C0H5 1083 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 MFSD1Q9H3U5 465 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 PNPLA3Q9NST1 481 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 FAF1Q9UNN5 650 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 GPR182O15218 404 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC7A4O43246 635 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 GSK3BP49841 420 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 DGKQP52824 942 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 IST1P53990 364 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 MTPNP58546 118 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 NRG1Q02297 640 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ANKDD1AQ495B1 522 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 SLC2A7Q6PXP3 512 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ERMP1Q7Z2K6 904 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 LGI2Q8N0V4 545 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 OR52B6Q8NGF0 335 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ERLEC1Q96DZ1 483 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 CCDC97Q96F63 343 aaPredicted RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 HAUS8Q9BT25 410 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 CLK4Q9HAZ1 481 aaKnown RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 EIF2B4Q9UI10 523 aaKnown RBP13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 ZMYM5Q9UJ78 669 aa13.96□□□□□ -0.17
CACNA1A-228ENST00000636610 DLGAP1O14490 977 aa13.96□□□□□ -0.18
CACNA1A-228ENST00000636610 CLOCKO15516 846 aa13.96□□□□□ -0.18
CACNA1A-228ENST00000636610 LBPP18428 481 aa13.96□□□□□ -0.18
CACNA1A-228ENST00000636610 FASP25445 335 aa13.96□□□□□ -0.18
CACNA1A-228ENST00000636610 CYP2C18P33260 490 aa13.96□□□□□ -0.18
CACNA1A-228ENST00000636610 LIPEQ05469 1076 aa13.96□□□□□ -0.18
CACNA1A-228ENST00000636610 SGO1Q5FBB7 561 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms