RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 ZNF616Q08AN1 781 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ZNF155Q12901 538 aaPredicted RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MFSD13AQ14CX5 517 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 KIAA0040Q15053 153 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 PGM5Q15124 567 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CNN3Q15417 329 aaKnown RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CYP1B1Q16678 543 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 WASHC4Q2M389 1173 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 VWC2Q2TAL6 325 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ASB16-AS1Q495Z4 193 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CBWD6Q4V339 395 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ZNF766Q5HY98 468 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CBWD3Q5JTY5 395 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CBWD5Q5RIA9 395 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MARCH8Q5T0T0 291 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 LINC00242Q5T6M2 205 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ARHGEF16Q5VV41 709 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SLFN12LQ6IEE8 588 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 RSPO2Q6UXX9 243 aaPredicted RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SIGLEC15Q6ZMC9 328 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ZBTB49Q6ZSB9 765 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CAPN12Q6ZSI9 719 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MFSD6Q6ZSS7 791 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 HAUS6Q7Z4H7 955 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FGD2Q7Z6J4 655 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 TFAP2DQ7Z6R9 452 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ERICH1Q86X53 443 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 TGIF2LYQ8IUE0 185 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FBXO16Q8IX29 292 aaPredicted RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 OR4N5Q8IXE1 308 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 PHC2Q8IXK0 858 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 RDH10Q8IZV5 341 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FAM109AQ8N4B1 249 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SIRT6Q8N6T7 355 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 LINC01465Q8N7H1 131 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 AQP11Q8NBQ7 271 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 BBS10Q8TAM1 723 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 NEIL3Q8TAT5 605 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ZNF519Q8TB69 540 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 HELQQ8TDG4 1101 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 EPS8L3Q8TE67 593 aaKnown RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MRPS27Q92552 414 aaKnown RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 RND1Q92730 232 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 KAT2BQ92831 832 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SNAPC3Q92966 411 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 USP7Q93009 1102 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ATG4CQ96DT6 458 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SCRN2Q96FV2 425 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CLMNQ96JQ2 1002 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MRGPRX4Q96LA9 322 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 C3orf30Q96M34 536 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ACAP3Q96P50 834 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 AGAP4Q96P64 663 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FNBP1Q96RU3 617 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ZNF607Q96SK3 696 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FOXB1Q99853 325 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FOXC2Q99958 501 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 NAA38Q9BRA0 125 aaKnown RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CHCHD5Q9BSY4 110 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MKNK1Q9BUB5 465 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 TIMM21Q9BVV7 248 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FUT8Q9BYC5 575 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 GBP3Q9H0R5 595 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CCDC8Q9H0W5 538 aaPredicted RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CSTL1Q9H114 145 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 HIPK3Q9H422 1215 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 FKRPQ9H9S5 495 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ZNF287Q9HBT7 754 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 PNPLA8Q9NP80 782 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ANO2Q9NQ90 1003 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 NECTIN3Q9NQS3 549 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 PANK4Q9NVE7 773 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SOHLH2Q9NX45 425 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 TEX10Q9NXF1 929 aaPredicted RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 ZDHHC7Q9NXF8 308 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 COQ3Q9NZJ6 369 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 DKK4Q9UBT3 224 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 APEX2Q9UBZ4 518 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MTMR6Q9Y217 621 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 POLR3KQ9Y2Y1 108 aaPredicted RBP-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SNX9Q9Y5X1 595 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 SLCO1B1Q9Y6L6 691 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 U3KQK5 164 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 MTORP42345 2549 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 CMYA5Q8N3K9 4069 aa-1.04□□□□□ -2.58
CDKL5-210ENST00000636046 TNRC6AQ8NDV7 1962 aaKnown RBP-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 ALPK3Q96L96 1907 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 CACNA1HO95180 2353 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 LAMA4Q16363 1823 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 USP19O94966 1318 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 DNAH1Q9P2D7 4330 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 IGLV5-45A0A087WSX0 123 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 A0A0A6YYJ9 748 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 LOC100653049A0A140TA62 436 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 TCRBV5S4A2TA0A5A2 114 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 FSD2A1L4K1 749 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 C7orf66A4D0T2 115 aa-1.05□□□□□ -2.58
CDKL5-210ENST00000636046 ZNF487B1APH4 448 aa-1.05□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms