RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TMEM198Q66K66 360 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 BORAQ6PGQ7 559 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 TFAP2DQ7Z6R9 452 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 AHI1Q8N157 1196 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 RIN3Q8TB24 985 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 PHF21BQ96EK2 531 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 DCUN1D1Q96GG9 259 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 C19orf43Q9BQ61 176 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 TTLL2Q9BWV7 592 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 SPATA16Q9BXB7 569 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 RBM38Q9H0Z9 239 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 PAPOLBQ9NRJ5 636 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MED16Q9Y2X0 877 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MRPS23Q9Y3D9 190 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 AK5Q9Y6K8 562 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 DENND4CQ5VZ89 1909 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 BBIP1A8MTZ0 92 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MTHFD2P13995 350 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ZNF26P17031 533 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 TSPAN8P19075 237 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 GPX3P22352 226 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ETFBP38117 255 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 HSPA13P48723 471 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 NME5P56597 212 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 HERVK_113P63132 956 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ROR2Q01974 943 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 TLR1Q15399 786 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 SHHQ15465 462 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 LIN52Q52LA3 116 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 UNC50Q53HI1 259 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CWF19L1Q69YN2 538 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 PTAR1Q7Z6K3 402 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 DNAJB7Q7Z6W7 309 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 CUZD1Q86UP6 607 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 DCP1BQ8IZD4 617 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 TSPEARQ8WU66 669 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 SLCO4A1Q96BD0 722 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ROPN1LQ96C74 230 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ZNF597Q96LX8 424 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ATOH8Q96SQ7 321 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 NDNQ99608 321 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 MGME1Q9BQP7 344 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 ERVK-6Q9BXR3 956 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 SEZ6LQ9BYH1 1024 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 VWA7Q9Y334 891 aa7.16□□□□□ -1.26
CTNNA1-244ENST00000627109 LTBP2Q14767 1821 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 TRIM64CA6NLI5 447 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 F8W810 466 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 H3BNC9 293 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 J3KR12 359 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 CRCPO75575 148 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 HNRNPLP14866 589 aaKnown RBP eCLIP7.15□□□□□ -1.262e-6■■■□□ 15.8
CTNNA1-244ENST00000627109 NDUFV2P19404 249 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 HLA-DPA1P20036 260 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 FGFR3P22607 806 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 OR1G1P47890 313 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ZFP36L2P47974 494 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 CHN2P52757 468 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 TXNL4AP83876 142 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 SLC10A7Q0GE19 358 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 GRIK2Q13002 908 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 TRIM25Q14258 630 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 NFE2Q16621 373 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ALFQ53S48 1182 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 SLC24A5Q71RS6 500 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 PNPLA1Q8N8W4 532 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 SNX31Q8N9S9 440 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ELAC1Q9H777 363 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 IL23AQ9NPF7 189 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 INTS10Q9NVR2 710 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ARMC1Q9NVT9 282 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 MPP6Q9NZW5 540 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 TTC3P53804 2025 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 SMIM31A0A1B0GVY4 71 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 TMEM233B4DJY2 109 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ENPP3O14638 875 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 FGF1P05230 155 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ETS2P15036 469 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 CR2P20023 1033 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 KCNC1P48547 511 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ARSDP51689 593 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ZNF140P52738 457 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 DEFB103AP81534 67 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 RHDQ02161 417 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 FOLH1Q04609 750 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 SMARCB1Q12824 385 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 PDK3Q15120 406 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 RPS6KA2Q15349 733 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 AP1ARQ63HQ0 302 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 REP15Q6BDI9 236 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 NADSYN1Q6IA69 706 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 KIAA1841Q6NSI8 718 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 IGSF8Q969P0 613 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 ZUFSPQ96AP4 578 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 PTERQ96BW5 349 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 CNBD2Q96M20 576 aa7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 PRICKLE1Q96MT3 831 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-244ENST00000627109 CENPKQ9BS16 269 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms