RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 FRMD8Q9BZ67 464 aaPredicted RBP13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 C10orf88Q9H8K7 445 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 KCND1Q9NSA2 647 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 APPL1Q9UKG1 709 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 SNX12Q9UMY4 172 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 BTBD3Q9Y2F9 522 aa13.93□□□□□ -0.18
SNRPA1-216ENST00000626000 TMEM202A6NGA9 273 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 K7ESM1 405 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 STX7O15400 261 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 GP1BAP07359 652 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 FTH1P19P0C7X4 201 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 LPOP22079 712 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 ACP1P24666 158 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 CXCR5P32302 372 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 SPAM1P38567 509 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 CDK16Q00536 496 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 E2F1Q01094 437 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 PROX2Q3B8N5 592 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 ZNF542PQ5EBM4 170 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 N4BP2L1Q5TBK1 243 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 ARMC3Q5W041 872 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 KCTD11Q693B1 232 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 GALNT15Q8N3T1 639 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 GRK7Q8WTQ7 553 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 C1orf54Q8WWF1 131 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 ADAMTS14Q8WXS8 1223 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 SCAMP4Q969E2 229 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 SCARF2Q96GP6 870 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 COX14Q96I36 57 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 CAMK1GQ96NX5 476 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 OSBPL9Q96SU4 736 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 FGF22Q9HCT0 170 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 EIF2B3Q9NR50 452 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 CD84Q9UIB8 345 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 LRP4O75096 1905 aa13.92□□□□□ -0.18
SNRPA1-216ENST00000626000 TDRD6O60522 2096 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SPAARA0A1B0GVQ0 90 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 FFAR2O15552 330 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 ZW10O43264 779 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SIGLEC6O43699 453 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 VEGFDO43915 354 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 RFPL3O75679 317 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SOD1P00441 154 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 AGTP01019 485 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SLC4A1P02730 911 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 PIRTP0C851 137 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 CKMT1AP12532 417 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 CHRNA4P43681 627 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 GDF10P55107 478 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 GNG11P61952 73 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SHC2P98077 582 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 CDH17Q12864 832 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SEMA5AQ13591 1074 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SNX1Q13596 522 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SIX1Q15475 284 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 TPRG1LQ5T0D9 272 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 C6orf132Q5T0Z8 1188 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 RD3Q7Z3Z2 195 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 GALNT13Q8IUC8 556 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 TTC30BQ8N4P2 665 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 WDR48Q8TAF3 677 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 OR1E3Q8WZA6 343 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 GLYATL1Q969I3 302 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 TSACCQ96A04 125 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 PDXPQ96GD0 296 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 RUNDC3BQ96NL0 473 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 CARS2Q9HA77 564 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 TRIM39Q9HCM9 518 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 CYP4F12Q9HCS2 524 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 RAB6BQ9NRW1 208 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 UCKL1Q9NWZ5 548 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 IL17CQ9P0M4 197 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 RNF14Q9UBS8 474 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 KLF15Q9UIH9 416 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 MOSPD1Q9UJG1 213 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 SPO11Q9Y5K1 396 aa13.91□□□□□ -0.18
SNRPA1-216ENST00000626000 GLYATL1P3A0A0U1RQE8 302 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 CTAGE9A4FU28 777 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 KLHL33A6NCF5 533 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 GOLGA8CPA6NN73 597 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 F5H423 210 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 GIPC1O14908 333 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 SUN1O94901 812 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 DKK1O94907 266 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 SLC25A14O95258 325 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 METTL18O95568 372 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 ASMTLO95671 621 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 ATP1A1P05023 1023 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 CEACAM5P06731 702 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 BPIP17213 487 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 PMLP29590 882 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 FNTAP49354 379 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 SARNPP82979 210 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 PTPRRQ15256 657 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 NR0B2Q15466 257 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 CYP1B1Q16678 543 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 LDLRAP1Q5SW96 308 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 NLRP9Q7RTR0 991 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 RBFAQ8N0V3 343 aa13.9□□□□□ -0.18
SNRPA1-216ENST00000626000 PDCD7Q8N8D1 485 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms