RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PYCR3Q53H96 274 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 TCP11X2Q5H9J9 407 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 PPP6R3Q5H9R7 873 aaPredicted RBP14.59□□□□□ -0.07
PNKP-218ENST00000625299 FHL5Q5TD97 284 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 WDR74Q6RFH5 385 aaPredicted RBP14.59□□□□□ -0.07
PNKP-218ENST00000625299 RFLNAQ6ZTI6 216 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 TP53INP2Q8IXH6 220 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 CCDC13Q8IYE1 715 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 EFCAB3Q8N7B9 438 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 AP2M1Q96CW1 435 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 ULBP3Q9BZM4 244 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 PRDM8Q9NQV8 689 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 PCSK1NQ9UHG2 260 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 CROTQ9UKG9 612 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 PHTF1Q9UMS5 762 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 PRKAB1Q9Y478 270 aa14.59□□□□□ -0.07
PNKP-218ENST00000625299 RP1L1Q8IWN7 2480 aaPredicted RBP14.59□□□□□ -0.07
PNKP-218ENST00000625299 TCRBV5S1A1TA0A578 114 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 PSMD11O00231 422 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 INPP4BO15327 924 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 SNX2O60749 519 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 KATNA1O75449 491 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 SOD1P00441 154 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 PSMA2P25787 234 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 TEAD1P28347 426 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 MAXP61244 160 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.58□□□□□ -0.08
PNKP-218ENST00000625299 TCTN3Q6NUS6 607 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 USP45Q70EL2 814 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 LZTR1Q8N653 840 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 SCAMP4Q969E2 229 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 SCARF2Q96GP6 870 aaPredicted RBP14.58□□□□□ -0.08
PNKP-218ENST00000625299 PCMTD1Q96MG8 357 aaPredicted RBP14.58□□□□□ -0.08
PNKP-218ENST00000625299 SNRNP25Q9BV90 132 aaKnown RBP14.58□□□□□ -0.08
PNKP-218ENST00000625299 NOD2Q9HC29 1040 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 CNOT8Q9UFF9 292 aaKnown RBP14.58□□□□□ -0.08
PNKP-218ENST00000625299 ZNHIT2Q9UHR6 403 aa14.58□□□□□ -0.08
PNKP-218ENST00000625299 CREBBPQ92793 2442 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 TNRC6AQ8NDV7 1962 aaKnown RBP14.57□□□□□ -0.08
PNKP-218ENST00000625299 CDC14CA4D256 554 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 TTLL8A6PVC2 850 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 RFPL1O75677 317 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 FURINP09958 794 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 ZNF28P17035 718 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 EEF1GP26641 437 aaKnown RBP14.57□□□□□ -0.08
PNKP-218ENST00000625299 DPTQ07507 201 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 LRP8Q14114 963 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 BECN1Q14457 450 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 CRTC2Q53ET0 693 aaPredicted RBP14.57□□□□□ -0.08
PNKP-218ENST00000625299 PPP1R15BQ5SWA1 713 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 ERMARDQ5T6L9 678 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 LRRC66Q68CR7 880 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 ADAMTSL4Q6UY14 1074 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 CHST15Q7LFX5 561 aaPredicted RBP14.57□□□□□ -0.08
PNKP-218ENST00000625299 TMEM135Q86UB9 458 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 CBARPQ8N350 705 aaPredicted RBP14.57□□□□□ -0.08
PNKP-218ENST00000625299 PGBD5Q8N414 524 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 GALNT6Q8NCL4 622 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 ELMO2Q96JJ3 720 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 NUDCD1Q96RS6 583 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 PEBP4Q96S96 227 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 AGAP2Q99490 1192 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 ABCG8Q9H221 673 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 SARS2Q9NP81 518 aaKnown RBP14.57□□□□□ -0.08
PNKP-218ENST00000625299 DACH1Q9UI36 760 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 TLK1Q9UKI8 766 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 POLHQ9Y253 713 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 KCNK6Q9Y257 313 aa14.57□□□□□ -0.08
PNKP-218ENST00000625299 A1L4Q6 167 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 PGLSO95336 258 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 ACP5P13686 325 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 HSPA9P38646 679 aaKnown RBP14.56□□□□□ -0.08
PNKP-218ENST00000625299 MAP7Q14244 749 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 FKBP15Q5T1M5 1219 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 ARMC12Q5T9G4 340 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 CAPRIN2Q6IMN6 1127 aaKnown RBP14.56□□□□□ -0.08
PNKP-218ENST00000625299 C6orf15Q6UXA7 325 aaPredicted RBP14.56□□□□□ -0.08
PNKP-218ENST00000625299 TECPR1Q7Z6L1 1165 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 SLC9B2Q86UD5 537 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 BBS5Q8N3I7 341 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 SPOCK2Q92563 424 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 SH3KBP1Q96B97 665 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 STAMBPL1Q96FJ0 436 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 SCRN2Q96FV2 425 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 ZNF599Q96NL3 588 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 SMIM14Q96QK8 99 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 TWSG1Q9GZX9 223 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 TBC1D29Q9UFV1 150 aa14.56□□□□□ -0.08
PNKP-218ENST00000625299 PCYT1BQ9Y5K3 369 aaPredicted RBP14.56□□□□□ -0.08
PNKP-218ENST00000625299 OAS3Q9Y6K5 1087 aaKnown RBP14.56□□□□□ -0.08
PNKP-218ENST00000625299 ZNF106Q9H2Y7 1883 aaKnown RBP14.56□□□□□ -0.08
PNKP-218ENST00000625299 EIF3CLB5ME19 914 aaKnown RBP14.55□□□□□ -0.08
PNKP-218ENST00000625299 ATMINO43313 823 aaPredicted RBP14.55□□□□□ -0.08
PNKP-218ENST00000625299 DNAJB5O75953 348 aa14.55□□□□□ -0.08
PNKP-218ENST00000625299 ATP1A1P05023 1023 aaKnown RBP14.55□□□□□ -0.08
PNKP-218ENST00000625299 TPM2P07951 284 aa14.55□□□□□ -0.08
PNKP-218ENST00000625299 SEPHS1P49903 392 aa14.55□□□□□ -0.08
PNKP-218ENST00000625299 EPHA4P54764 986 aa14.55□□□□□ -0.08
PNKP-218ENST00000625299 GFERP55789 205 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms