RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CACNA1EQ15878 2313 aa18.48■□□□□ 0.55
CIRBP-245ENST00000621399 PI4KAP42356 2102 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 TTI1O43156 1089 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 LDB2O43679 373 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 RXRGP48443 463 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 LIMK1P53667 647 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 SESN2P58004 480 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-245ENST00000621399 TMPRSS15P98073 1019 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 EIF2B5Q13144 721 aaKnown RBP18.47■□□□□ 0.55
CIRBP-245ENST00000621399 LAMB3Q13751 1172 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 TUBB2AQ13885 445 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 ANKRD22Q5VYY1 191 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 OR56A4Q8NGH8 313 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 HIC2Q96JB3 615 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 TUBB2BQ9BVA1 445 aa18.47■□□□□ 0.55
CIRBP-245ENST00000621399 GLYATL1P3A0A0U1RQE8 302 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 TMEM202A6NGA9 273 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 FADS2P1A8MWK0 482 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 YKT6O15498 198 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 CSF2P04141 144 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 ZNF883P0CG24 379 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 NME1P15531 152 aaKnown RBP18.46■□□□□ 0.55
CIRBP-245ENST00000621399 ADRA1DP25100 572 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 NPY2RP49146 381 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 ZNF140P52738 457 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-245ENST00000621399 PPARDQ03181 441 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 SLC14A1Q13336 389 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 SUZ12Q15022 739 aaKnown RBP18.46■□□□□ 0.55
CIRBP-245ENST00000621399 SHBQ15464 509 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 CCDC38Q502W7 563 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 PDPK2PQ6A1A2 396 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 LRRC8BQ6P9F7 803 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 FAM151BQ6UXP7 276 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 ZNF572Q7Z3I7 529 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-245ENST00000621399 RD3Q7Z3Z2 195 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 MAATS1Q7Z4T9 603 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 PPIL6Q8IXY8 311 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 OR13C4Q8NGS5 318 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 TSACCQ96A04 125 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-245ENST00000621399 TRIM51Q9BSJ1 452 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 BFARQ9NZS9 450 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 KLQ9UEF7 1012 aa18.46■□□□□ 0.55
CIRBP-245ENST00000621399 CDV3Q9UKY7 258 aaKnown RBP18.46■□□□□ 0.55
CIRBP-245ENST00000621399 HEATR9A2RTY3 570 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 MROH6A6NGR9 719 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 H3BM21 787 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 GOLGA8MH3BSY2 632 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 SDC3O75056 442 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 TMEM63AO94886 807 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 JUNDP17535 347 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 EPHA8P29322 1005 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-245ENST00000621399 HADHAP40939 763 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 SRP54P61011 504 aaKnown RBP18.45■□□□□ 0.54
CIRBP-245ENST00000621399 HNRNPKP61978 463 aaKnown RBP eCLIP18.45■□□□□ 0.54
CIRBP-245ENST00000621399 BNIP3Q12983 259 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 CHRNA6Q15825 494 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 ALG11Q2TAA5 492 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 DOK6Q6PKX4 331 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 ZNF534Q76KX8 674 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 PCGF5Q86SE9 256 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 TRIM74Q86UV6 250 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 HID1Q8IV36 788 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 NAT8LQ8N9F0 302 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 DTX3LQ8TDB6 740 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 BTN2A2Q8WVV5 523 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 RANBP9Q96S59 729 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 C19orf43Q9BQ61 176 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 SLC13A1Q9BZW2 595 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 KLF15Q9UIH9 416 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 FKBPLQ9UIM3 349 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 MOSPD1Q9UJG1 213 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 CNOT6Q9ULM6 557 aaKnown RBP18.45■□□□□ 0.54
CIRBP-245ENST00000621399 PNMA8BQ9ULN7 279 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-245ENST00000621399 TMEM98Q9Y2Y6 226 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 PCDHGB2Q9Y5G2 931 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 MRFAP1Q9Y605 127 aa18.45■□□□□ 0.54
CIRBP-245ENST00000621399 KNL1Q8NG31 2342 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 CCDC78A2IDD5 438 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 DNALI1O14645 258 aaPredicted RBP18.44■□□□□ 0.54
CIRBP-245ENST00000621399 TNFRSF10CO14798 259 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 PCDHGA12O60330 932 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 RASGRP1O95267 797 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 ASMTLO95671 621 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 TNFP01375 233 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 CEACAM5P06731 702 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 BLKP51451 505 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 MRPS25P82663 173 aaKnown RBP18.44■□□□□ 0.54
CIRBP-245ENST00000621399 SKIDA1Q1XH10 827 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 RSPO4Q2I0M5 234 aaPredicted RBP18.44■□□□□ 0.54
CIRBP-245ENST00000621399 ATP13A5Q4VNC0 1218 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 PCID2Q5JVF3 399 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 RNASEH2BQ5TBB1 312 aaKnown RBP18.44■□□□□ 0.54
CIRBP-245ENST00000621399 IZUMO3Q5VZ72 239 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 NLRP9Q7RTR0 991 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 GATAD2AQ86YP4 633 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 PHACTR4Q8IZ21 702 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 MCUQ8NE86 351 aa18.44■□□□□ 0.54
CIRBP-245ENST00000621399 PPHLN1Q8NEY8 458 aaKnown RBP18.44■□□□□ 0.54
CIRBP-245ENST00000621399 SAP25Q8TEE9 199 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms