RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 HNMTP50135 292 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 RPP38P78345 283 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 GHRHRQ02643 423 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 AUHQ13825 339 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 DLK2Q6UY11 383 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ZCCHC23Q6ZST2 131 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF605Q86T29 641 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 STK32CQ86UX6 486 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 GAL3ST4Q96RP7 486 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 RIBC2Q9H4K1 309 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 FAM124BQ9H5Z6 455 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 VWA7Q9Y334 891 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 RBM7Q9Y580 266 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 C22orf31O95567 290 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ITGA2P17301 1181 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 PIK3R1P27986 724 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 OC90Q02509 493 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF155Q12901 538 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 DLG2Q15700 870 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 INAQ16352 499 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 CCNYL2Q5T2Q4 361 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ZBTB2Q8N680 514 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 BPIFB1Q8TDL5 484 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 GDPD5Q8WTR4 605 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 PANX1Q96RD7 426 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC9A7Q96T83 725 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 PCDH18Q9HCL0 1135 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 DNAJC11Q9NVH1 559 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF214Q9UL59 606 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 DNM1LO00429 736 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 TSPAN19P0C672 248 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 PKMP14618 531 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ROR2Q01974 943 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 TEX44Q53QW1 395 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 C16orf46Q6P387 395 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 EIF3MQ7L2H7 374 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 FAM129CQ86XR2 697 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 NEK7Q8TDX7 302 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 CCDC177Q9NQR7 707 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 NECTIN3Q9NQS3 549 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 PSMD13Q9UNM6 376 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC28A2O43868 658 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 TNFAIP8O95379 198 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 PRAMEF1O95521 474 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 WARSP23381 471 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 DRG2P55039 364 aaKnown RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 PRKG2Q13237 762 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 POMZP3Q6PJE2 187 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 RHBDF2Q6PJF5 856 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 ENPP7Q6UWV6 458 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 KIAA1143Q96AT1 154 aaPredicted RBP9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 RAD9AQ99638 391 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 DPYSL5Q9BPU6 564 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 FANCFQ9NPI8 374 aa9.76□□□□□ -0.85
CLTCL1-211ENST00000621271 MYBPHLA2RUH7 354 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PEX12O00623 359 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 UBXN7O94888 489 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ITGAVP06756 1048 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 GIMD1P0DJR0 217 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ALADP13716 330 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CDH5P33151 784 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PTDSS1P48651 473 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 MYBPC1Q00872 1141 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 BTN2A1Q7KYR7 527 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 SNX32Q86XE0 403 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 AVL9Q8NBF6 648 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ADCY4Q8NFM4 1077 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 KCTD4Q8WVF5 259 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CLEC4DQ8WXI8 215 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 RIT1Q92963 219 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 TEKT5Q96M29 485 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 SLC38A2Q96QD8 506 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 FNDC11Q9BVV2 318 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 WDR26Q9H7D7 661 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 hCG_1818297A0A087WSY0 165 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 FGF18O76093 207 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PRG2P13727 222 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LGALS3BPQ08380 585 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 INO80DQ53TQ3 878 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ZNF549Q6P9A3 640 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PIWIL4Q7Z3Z4 852 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 BRSK1Q8TDC3 778 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 RAD51AP1Q96B01 352 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CDADC1Q9BWV3 514 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PCYOX1Q9UHG3 505 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 RPL26L1Q9UNX3 145 aaKnown RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 B4DGG1 531 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 FFAR2O15552 330 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PAPSS1O43252 624 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 SMNDC1O75940 238 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ECDO95905 644 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 PSMB9P28065 219 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 GNPDA1P46926 289 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 LAPTM5Q13571 262 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 SH3D19Q5HYK7 790 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 FBXO46Q6PJ61 603 aaPredicted RBP9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 TMC8Q8IU68 726 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 ZDHHC13Q8IUH4 622 aa9.75□□□□□ -0.85
CLTCL1-211ENST00000621271 CACTIN-AS1Q8N1I8 211 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms