RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 ISY1Q9ULR0 285 aaKnown RBP5.18□□□□□ -1.58
VPS29-212ENST00000621131 ICAM5Q9UMF0 924 aa5.18□□□□□ -1.58
VPS29-212ENST00000621131 SLC45A1Q9Y2W3 748 aa5.18□□□□□ -1.58
VPS29-212ENST00000621131 THSD7BQ9C0I4 1608 aa5.18□□□□□ -1.58
VPS29-212ENST00000621131 FAM205AQ6ZU69 1335 aa5.18□□□□□ -1.58
VPS29-212ENST00000621131 TRIOBPQ9H2D6 2365 aa5.18□□□□□ -1.58
VPS29-212ENST00000621131 MYH2Q9UKX2 1941 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 CACNA1AO00555 2505 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 A0A0G2JLW4 131 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 TSPY2A6NKD2 308 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 SH2B2O14492 632 aaPredicted RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 SEPT4O43236 478 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 RANBP6O60518 1105 aaKnown RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 KRT38O76015 456 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 METTL18O95568 372 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 DPEP1P16444 411 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 GJC1P36383 396 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 BTDP43251 543 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 RBM5P52756 815 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS29-212ENST00000621131 PRKAA2P54646 552 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 EVCP57679 992 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 FKBP1AP62942 108 aaKnown RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 DYNLL1P63167 89 aaKnown RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 ARHGAP8P85298 464 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 ADORA2A-AS1P86434 159 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 BLMHQ13867 455 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 BYSLQ13895 437 aaKnown RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 CTTNQ14247 550 aaKnown RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 KLHL40Q2TBA0 621 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 SBK1Q52WX2 424 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 FAM76BQ5HYJ3 339 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 ATL3Q6DD88 541 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 C1orf228Q6PIY5 440 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 OLFM4Q6UX06 510 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 CHST3Q7LGC8 479 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 TEX11Q8IYF3 940 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 GPT2Q8TD30 523 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 SDR42E1Q8WUS8 393 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 NR4A3Q92570 626 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 TEKT1Q969V4 418 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 ZNF396Q96N95 335 aaPredicted RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 NPFFR1Q9GZQ6 430 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 CXorf56Q9H5V9 222 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 PLCB1Q9NQ66 1216 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 RBM28Q9NW13 759 aaKnown RBP5.17□□□□□ -1.58
VPS29-212ENST00000621131 MCM9Q9NXL9 1143 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 GRHPRQ9UBQ7 328 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 POLLQ9UGP5 575 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 FBXO40Q9UH90 709 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 CFAP45Q9UL16 551 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 DHDHQ9UQ10 334 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 NEDD4P46934 1319 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 MYO3BQ8WXR4 1341 aa5.17□□□□□ -1.58
VPS29-212ENST00000621131 ROBO3Q96MS0 1386 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 SLX4Q8IY92 1834 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 SBF1O95248 1867 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 A0A1B0GVM2 712 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 LINC01553A4QN01 128 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 OR6C68A6NDL8 312 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 HMX3A6NHT5 357 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 IPO5O00410 1097 aaKnown RBP5.16□□□□□ -1.58
VPS29-212ENST00000621131 SLC16A5O15375 505 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 PRKAB2O43741 272 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 STRNO43815 780 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 ECE2O60344 883 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 SERPINI2O75830 405 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 LETM1O95202 739 aaPredicted RBP5.16□□□□□ -1.58
VPS29-212ENST00000621131 CBX6O95503 412 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 TSPY3P0CV98 308 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 TSPY8P0CW00 308 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 YWHAQP27348 245 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 MXI1P50539 228 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 CCDC38Q502W7 563 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 RUNDC3AQ59EK9 446 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 EFHC1Q5JVL4 640 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 NCAPH2Q6IBW4 605 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 CTR9Q6PD62 1173 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 ADGRA1Q86SQ6 560 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 PATL1Q86TB9 770 aaKnown RBP5.16□□□□□ -1.58
VPS29-212ENST00000621131 ZNF444Q8N0Y2 327 aaPredicted RBP5.16□□□□□ -1.58
VPS29-212ENST00000621131 SETD9Q8NE22 299 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 CTCFLQ8NI51 663 aaPredicted RBP5.16□□□□□ -1.58
VPS29-212ENST00000621131 ANP32BQ92688 251 aaKnown RBP5.16□□□□□ -1.58
VPS29-212ENST00000621131 C8orf76Q96K31 380 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 MVB12BQ9H7P6 319 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 KAT14Q9H8E8 782 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 TLR8Q9NR97 1041 aaKnown RBP5.16□□□□□ -1.58
VPS29-212ENST00000621131 TMOD2Q9NZR1 351 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 HDAC6Q9UBN7 1215 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 CLDN16Q9Y5I7 305 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 MYH15Q9Y2K3 1946 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 STK36Q9NRP7 1315 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 VCANP13611 3396 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 FOCADQ5VW36 1801 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 NID2Q14112 1375 aa5.16□□□□□ -1.58
VPS29-212ENST00000621131 BAZ2AQ9UIF9 1905 aaKnown RBP5.15□□□□□ -1.58
VPS29-212ENST00000621131 A0A096LPK6 155 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 GPR75-ASB3A0A0A6YYF3 556 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 PLSCR5A0PG75 271 aa5.15□□□□□ -1.59
VPS29-212ENST00000621131 PPIP5K2O43314 1243 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms