RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 VOPP1Q96AW1 172 aa18.96■□□□□ 0.63
PSPC1-206ENST00000619300 TUBGCP5Q96RT8 1024 aa18.96■□□□□ 0.63
PSPC1-206ENST00000619300 LBHD1Q9BQE6 289 aaPredicted RBP18.96■□□□□ 0.63
PSPC1-206ENST00000619300 DERL2Q9GZP9 239 aa18.96■□□□□ 0.63
PSPC1-206ENST00000619300 MCOLN1Q9GZU1 580 aa18.96■□□□□ 0.63
PSPC1-206ENST00000619300 EML4Q9HC35 981 aaKnown RBP18.96■□□□□ 0.63
PSPC1-206ENST00000619300 TCF7L2Q9NQB0 619 aa18.96■□□□□ 0.63
PSPC1-206ENST00000619300 SLC25A13Q9UJS0 675 aa18.96■□□□□ 0.63
PSPC1-206ENST00000619300 C1orf232A0A0U1RR37 186 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 SPECC1L-ADORA2AF8WAN1 911 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 H3BMM5 538 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 SMIM24O75264 130 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 BMP1P13497 986 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 HNRNPLP14866 589 aaKnown RBP eCLIP18.95■□□□□ 0.626e-7■■□□□ 13.2
PSPC1-206ENST00000619300 TCF3P15923 654 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 CPA2P48052 419 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 NFKB2Q00653 900 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 SULT2A1Q06520 285 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 RAD51Q06609 339 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 ACCSLQ4AC99 568 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 LY6G5CQ5SRR4 150 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 STK40Q8N2I9 435 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 ZNF707Q96C28 371 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-206ENST00000619300 OR52B2Q96RD2 323 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 GPR21Q99679 349 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 CEP44Q9C0F1 390 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 COMMD10Q9Y6G5 202 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 GRXCR1A8MXD5 290 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 VPS26AO75436 327 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 CLDN7O95471 211 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 SP100P23497 879 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-206ENST00000619300 ECT2LQ008S8 904 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 GALNT1Q10472 559 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-206ENST00000619300 DMC1Q14565 340 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 OR4D1Q15615 310 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 CTSL3PQ5NE16 218 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 SH2D4BQ5SQS7 431 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 CERS6Q6ZMG9 384 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 ZSWIM9Q86XI8 627 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 TMPRSS6Q8IU80 811 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 FAM13CQ8NE31 585 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.95■□□□□ 0.62
PSPC1-206ENST00000619300 KIAA1191Q96A73 305 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 OTUB2Q96DC9 234 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 L3HYPDHQ96EM0 354 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 NUF2Q9BZD4 464 aa18.95■□□□□ 0.62
PSPC1-206ENST00000619300 WDR55Q9H6Y2 383 aaPredicted RBP18.95■□□□□ 0.62
PSPC1-206ENST00000619300 CAPN8A6NHC0 703 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 E9PBE3 544 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 KLHL41O60662 606 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 ESR1P03372 595 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 POU2F2P09086 479 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 CEBPBP17676 345 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 ATP6V0D1P61421 351 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 CBX2Q14781 532 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-206ENST00000619300 CARD16Q5EG05 197 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 ELMSAN1Q6PJG2 1045 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 FRMD7Q6ZUT3 714 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 RBM23Q86U06 439 aaKnown RBP18.94■□□□□ 0.62
PSPC1-206ENST00000619300 NKAPQ8N5F7 415 aaKnown RBP18.94■□□□□ 0.62
PSPC1-206ENST00000619300 PCDH20Q8N6Y1 951 aaKnown RBP18.94■□□□□ 0.62
PSPC1-206ENST00000619300 ING5Q8WYH8 240 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 TRMOQ9BU70 441 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 CPEB1Q9BZB8 566 aaKnown RBP18.94■□□□□ 0.62
PSPC1-206ENST00000619300 SUV39H2Q9H5I1 410 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 GALPQ9UBC7 116 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 SLCO3A1Q9UIG8 710 aa18.94■□□□□ 0.62
PSPC1-206ENST00000619300 HELZP42694 1942 aaKnown RBP18.94■□□□□ 0.62
PSPC1-206ENST00000619300 MYO7AQ13402 2215 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GOLGA8QA0A0J9YX86 632 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GOLGA8OA6NCC3 632 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GOLGA8NF8WBI6 632 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 BNIP3LO60238 219 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 POP4O95707 220 aaKnown RBP18.93■□□□□ 0.62
PSPC1-206ENST00000619300 CA3P07451 260 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 EPHA3P29320 983 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 ZNF678Q5SXM1 525 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 ACAD11Q709F0 780 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 ADIPOR2Q86V24 386 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 STAG3L4Q8TBR4 150 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 KCNJ9Q92806 393 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 ECHDC3Q96DC8 303 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 LYSMD1Q96S90 227 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 ATOH8Q96SQ7 321 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 P2RY12Q9H244 342 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GSTO2Q9H4Y5 243 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GTSE1Q9NYZ3 720 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 APPL1Q9UKG1 709 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 MRPS23Q9Y3D9 190 aaKnown RBP18.93■□□□□ 0.62
PSPC1-206ENST00000619300 WNT6Q9Y6F9 365 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GAPDHSO14556 408 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-206ENST00000619300 SLC9A3R1O14745 358 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GPR39O43194 453 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 NIPSNAP2O75323 286 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 MTHFD2P13995 350 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 PPARGP37231 505 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-206ENST00000619300 MNAT1P51948 309 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 HERVK_113P63132 956 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 GPM6BQ13491 265 aa18.93■□□□□ 0.62
PSPC1-206ENST00000619300 LSM12Q3MHD2 195 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms